Gene Daci_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4425 
Symbol 
ID5750013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4845937 
End bp4846992 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID641299527 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001565440 
Protein GI160899858 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.497807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.415554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCA TTCCATCCCT CTCGACCGCT GGCGGCGCCA GCCCCAGGCA GCATTCACAC 
CGTTTCGACG AAGGCAACCC GCTGGGCGAG CGCCGTGCCA TGCTGGCTGC GGGGCTGACG
GCGGCCATGA TGGTCGGGGA GATCGCAGGC GGGTACGGAT TCAACTCCAT GGCGCTGCTG
GCCGATGGCT GGCACATGGG ATCGCACGCG CTGGCGCTGG GGCTCTCAGC TGGCGCCTAT
GCGGCCGCGC GCAGATTGGC GGGCGATACG CGCTTTGCCT TCGGCACCTG GAAGATCGAG
GTGTTGGCCG GCTACACCAG CGCCATCTTG CTGCTGCTGG TGGCGGGCGG CATGGCCTGG
CAGTCGGTGC AGCGCCTGTT CTCGCCCTCG CCCATCCATT ACGAGCAGGC ACTGGGCGTG
GCCGCGCTGG GCCTGCTGGT CAACCTGGTC TGCGCCTGGC TGCTGAAGGG CGGGCACGGG
CATCACCATG GTCACGGTCA CGGTCACGGT CACGACCACG GACATCACCA CGGGCACGGC
AGGCATGCGC ACGGCGGCCA CGCGGGCGAC CGCCATCACG GCGACCACGG CGACCACGGT
GACCATGGCG ACCACGGCGA TCTCAACCTG CGCTCGGCCT ACCTGCATGT GCTGGCCGAT
GCCGCCACCT CGGTGATGGC CATCGCCGCC CTGTTCGGCG GCATGGCCTG GGGCCTGGGA
TGGCTGGACC CGGCCATGGG CCTGGCCGGC GCCGTGCTGG TGGCGGCATG GGCCATGGGC
CTGCTGCGCG ACAGCAGCCG CGTGCTGCTG GACGCCGAGA TGCACGCCCC CGTGGTCAGC
GAGGTGCGTG AGGCCATCGC CCAGGCGCCG TTTGCCGCGC AGATCTCCGA CCTGCATGTC
TGGCGCGTGG GCAAGGCGCG CTACGCCTGC ATCGTGGCGC TGGACGCGCC CGCAGGCGTG
GACCCCGATG CCGTGCGCCA GTTGCTTGGC GTGCACGAGG AACTGGTCCA CGTCACGGTG
GAGGTCAACC GGCCGCAGCC GGCTGCGACA CACTGA
 
Protein sequence
MHSIPSLSTA GGASPRQHSH RFDEGNPLGE RRAMLAAGLT AAMMVGEIAG GYGFNSMALL 
ADGWHMGSHA LALGLSAGAY AAARRLAGDT RFAFGTWKIE VLAGYTSAIL LLLVAGGMAW
QSVQRLFSPS PIHYEQALGV AALGLLVNLV CAWLLKGGHG HHHGHGHGHG HDHGHHHGHG
RHAHGGHAGD RHHGDHGDHG DHGDHGDLNL RSAYLHVLAD AATSVMAIAA LFGGMAWGLG
WLDPAMGLAG AVLVAAWAMG LLRDSSRVLL DAEMHAPVVS EVREAIAQAP FAAQISDLHV
WRVGKARYAC IVALDAPAGV DPDAVRQLLG VHEELVHVTV EVNRPQPAAT H