| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4407 |
|---|
| Symbol | |
|---|
| ID | 5749995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4824381 |
|---|
| End bp | 4825241 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641299510 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001565423 |
|---|
| Protein GI | 160899841 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.449221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG ACGATCTCAA AGCTGAACTG GAACTGTGCC GCGCCGAGAT CAGGTCCTTG
CGCGAGGAGC TGGACGAGAC CAATCGCGGC GTGGTCGCGC TCTACGGCGA GCTGGATGTG
CAGGCCGAGA AGCTGCGCAA GGCCACCGAA CTCAAGAGCC ATTTCCTCTC CTACATGAGC
CATGAGTTCC GCACGCCCAT AGGCGCCATC CGCAGCAACG CGCGCCTGCT GCTGGACCAT
GTGGATGGAC CGCTCACCAC CGAGCAGACC CGGCAGGTCG GCTTCATCCA GGAAACCGCC
GCCGAGTTTT CCGAGATGGT CAACGACCTG CTCGACCTGG CCAAGATCGA GGCGGGCCGC
CTGGAAATCT CGCCGGGCTG GTTCGAGATG ATGGATTTGT TTGCCGCCTT GCGCGGCATG
TTCAAGGCCA TGGCGGACAA CGTGGAGTTG AGCCTGGTGT TCGAAGAGCC CGGTGATCTG
CCGCGCTTCT ACACCGACAA CCGCAAGCTC TCGCAGATCC TCAGAAACTT CATCTCCAAT
GCACTGAAAT TCACGCCGCA GGGCGAGATC AAGGTGTCGG CAGAACTGGT GGGGGACATG
CTGGTGAAAT TCTCGGTGGC GGATACCGGC ATAGGCATCG CCTCGGAATT CCACGACGCG
ATTTTCAATG ACTTTACCCA GGTCGATTCA CCCATCCAGA AGCGCCTGCG GGGCACGGGC
CTGGGCCTGG CCCTGTCCAA GCAGCTGGCA CAGCTTCTGG GGGGCTGGGT GGAAGTGCAA
AGCGCCCTGG GCGAAGGCTC TACCTTTTCC GTGATCGTTC CCGCGCATCT TCCGGTCGAT
ACCAAGGATC TGAAGGCCTG A
|
|---|
| Protein sequence | MNEDDLKAEL ELCRAEIRSL REELDETNRG VVALYGELDV QAEKLRKATE LKSHFLSYMS
HEFRTPIGAI RSNARLLLDH VDGPLTTEQT RQVGFIQETA AEFSEMVNDL LDLAKIEAGR
LEISPGWFEM MDLFAALRGM FKAMADNVEL SLVFEEPGDL PRFYTDNRKL SQILRNFISN
ALKFTPQGEI KVSAELVGDM LVKFSVADTG IGIASEFHDA IFNDFTQVDS PIQKRLRGTG
LGLALSKQLA QLLGGWVEVQ SALGEGSTFS VIVPAHLPVD TKDLKA
|
|---|
| |