| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4406 |
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| Symbol | |
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| ID | 5749994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4822374 |
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| End bp | 4824335 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641299509 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001565422 |
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| Protein GI | 160899840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA ACACGACTGG AATGATTCTT CCCTCATTCG ACCGAAGCCT GCACACCATT
CTTGTCGTTG ACGACAACCC TGCCACGCGC TACTCCACGG CACGGGTCAT CAGGGCGGCG
GGATTCCAGA CGGTCGAGGC GGAAACCGGG GAAAAGGCCA TTGCCCTGTC GGAGACCGGC
GTGGCAGCCG TGGTGCTGGA TGTGCACTTG CCCGATATCT CGGGCTTCGA CGTATGCCGC
ACCATCCGCG GTGCGCGGCA TACCAGCCTG ATTCCCGTGG TGCACCTGTC GGCCGAGTAT
GTGCAAAGCA ACCACCAGGT GGCGGGCCTC AACGCCGGGG CCGACGCCTA CATGGTGCAC
CCCGTGGAGC CGCAGCTGCT GATTGCCACG CTGCATGCCC TGATCCGCGC ACGCCTGGCG
GAAGACGGGC TGCGCCGCAG CGAGTCACGC TTTCGCGCCA TCTATGACCA GGCGCCGGCG
GCCATGATGC TGGTCAGCGC CGACGGCCTG ATCAGCGATG CCAACTCCCA GGCGCAGGCA
CTGCTGCAGC GCGGCATTGA TGACCTGGCG GGCAAGCCGC TGGCCGGCTT TGTTCCGCAG
GCCGTTCGGG AAAAAGCTGC GCAGCAATTG GCAGAAGACC CCGAAAAGTC CTGGCGCGGC
GAGTTCCCCA TCCTCCCGGC AGACGGGCAG GAGCGCCTGA TCTCCTGGAA GTTCTCCGAT
CCCATCGAGC CCGGCATCCG CCTGGCCGTG GCCCAGGACC TGACGGAGTC CCTGGAGTTC
GAGAGGCAGC GCCAGCAGAT GCTGGAGCAG GAGCAGGCGG CGCGCGTGGC CGCAGAGCGC
ATCAGCCGCA CCAAGGATGA TTTTGTCGCC GTGCTCTCGC ATGAACTGCG CACGCCGCTG
TCCCTGCTCA ACGGGGGCAC GCATTTGCTC AAGCGCGCCA ACCTCAGCGA GGCCATGCTC
AAGAAAGGCA TAGATGCCAT CGAGAAAGGC GTGAAGGCGC AAAGCCGCAT CATTGCGGAC
ATTCTGGATA TCTCGCGCCT GACGACGGGA AAACTCAATC TGCACCGCGA GGAGGTCAAT
GTCTGCTCAT TGGCCGTGCA AAGCCTGGAG CCGTTGCGCG ACAACGCTGC CGACAAGAAC
ATCACCCTGC AGTTCGAGGC GCCGTCCGAT GACATCATGG CTTGGATCGA TGTCACGCGA
TTCCAGCAAA TCCTGTGGAA CCTGGTCTCC AACGCCATCA AGTTCTCCAA TGCGCGCAGC
GTGGTGAAGG TGGGCCTTGA AATCAGTGAC GAAAGCCTGG TGATGAGCGT GGCGGACGAG
GGCGTGGGCA TCGCGCCTGA ATTCCTTCCG CATGTCTTCG AGCGCTTCTC GCAGGCCTCC
GCCCCCGCCA CCCGTGGGCA TTCCGGCCTG GGATTGGGGC TGTCCATCGT CAAGCACCTG
GTGGAGCTGC ATGGGGGCAC CGTGCGTGCC CACAGCGAAG GCGTGGGCCG TGGCGTCACC
ATGCGGGTGG AGATTCCGCT GCACGAGGCA AGCGCCTCCC AGGCCGACCC GATGAATGCG
CATCTTGAAA ATGGCGAATC CCTGGAAGGC AAGGACATCG TCATCGTTGA AGACAATGCG
GACACCAGCG AAATACTGAA AGTGGTGCTG ACCGACCAGG GCGCCACCGT CAGGAGTGCC
GAGAACTTCG ACCAGGCCAT GGCCCTGGTC CAGGCGCAGT GGCCCAGCCT CATCGTCAGC
GACATAGGGC TGCCGGGAAA GGACGGGTTC CAGCTGGTCA AGGCCCTGCG CGAAGCGGAG
GCCGCGCACT TTGGCGGAAC AAGACAGGTA AAGATCGTGG CGCTCAGCGC CTTTGCCCGC
GAGCAGGACC GCACCCAGGC GCTGCAGGCA GGCTTTGACC AATATCTGGA AAAGCCGCTG
CAGCCGCACC TCCTCATCCG GGTGCTGCTG GGGCAGGGCT GA
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| Protein sequence | MPKNTTGMIL PSFDRSLHTI LVVDDNPATR YSTARVIRAA GFQTVEAETG EKAIALSETG
VAAVVLDVHL PDISGFDVCR TIRGARHTSL IPVVHLSAEY VQSNHQVAGL NAGADAYMVH
PVEPQLLIAT LHALIRARLA EDGLRRSESR FRAIYDQAPA AMMLVSADGL ISDANSQAQA
LLQRGIDDLA GKPLAGFVPQ AVREKAAQQL AEDPEKSWRG EFPILPADGQ ERLISWKFSD
PIEPGIRLAV AQDLTESLEF ERQRQQMLEQ EQAARVAAER ISRTKDDFVA VLSHELRTPL
SLLNGGTHLL KRANLSEAML KKGIDAIEKG VKAQSRIIAD ILDISRLTTG KLNLHREEVN
VCSLAVQSLE PLRDNAADKN ITLQFEAPSD DIMAWIDVTR FQQILWNLVS NAIKFSNARS
VVKVGLEISD ESLVMSVADE GVGIAPEFLP HVFERFSQAS APATRGHSGL GLGLSIVKHL
VELHGGTVRA HSEGVGRGVT MRVEIPLHEA SASQADPMNA HLENGESLEG KDIVIVEDNA
DTSEILKVVL TDQGATVRSA ENFDQAMALV QAQWPSLIVS DIGLPGKDGF QLVKALREAE
AAHFGGTRQV KIVALSAFAR EQDRTQALQA GFDQYLEKPL QPHLLIRVLL GQG
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