Gene Daci_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4397 
Symbol 
ID5749985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4814962 
End bp4815660 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID641299500 
Producthypothetical protein 
Protein accessionYP_001565413 
Protein GI160899831 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGT GCAGGCATCC GTTCTTCGGT TGGCGAGACC ATCGGCATTT CACCGCGACA 
CAGGTCACAA GGTCGGGCGG CGGTGAAGTG CCGTTGTGCG CTTGCCCGGC CGTGAAGAAC
CCCTCCCAGA TGAACGCCGC ATCCATCCTG CTCCTGGCCT TTGCCATGTC CACCGACGCC
TTTGCCGCTG CCGTGGGCAA GGGCTCCGCC CTGCTCAAAC CCCGCTGGTC CGAAGCCCTG
CGCACAGGCG CCATCTTCGG CATCATCGAA GCCCTGACAC CGCTGGCCGG CTGGGCGCTG
GGCTATGCGG CTTCCGACTA TGTCAAGGCA TGGGACCACT GGATTGCCTT CGTGCTGCTG
CTGGTGCTGG GCGGCCGCAT GCTGCTGGGC GCCCTCAAGG CCGCCGACGG CGAAGAAGAG
GCCAAGCCCG CCCGGCACGG CTTCTGGCTG CTGGTGGCCA CCGGATTCGC CACCAGCATC
GACGCCATGG CCGTGGGCGT GGGCCTGGCC TTCCTGGATG TGAGCATCAC CACCGTGGCC
CTGGCCATCG GCTTTGCTAC CTTCGCCATG GTGACCCTGG GCGTCATGGT CGGCCGCCTG
CTGGGCAGCA TTGCGGGCCG CTGGGCGGAG GCCGTTGGCG GTGTGCTGCT GATCGGCATC
GGCTCGGTGA TTCTGTATGA GCATCTGAGC GCCATCTGA
 
Protein sequence
MLWCRHPFFG WRDHRHFTAT QVTRSGGGEV PLCACPAVKN PSQMNAASIL LLAFAMSTDA 
FAAAVGKGSA LLKPRWSEAL RTGAIFGIIE ALTPLAGWAL GYAASDYVKA WDHWIAFVLL
LVLGGRMLLG ALKAADGEEE AKPARHGFWL LVATGFATSI DAMAVGVGLA FLDVSITTVA
LAIGFATFAM VTLGVMVGRL LGSIAGRWAE AVGGVLLIGI GSVILYEHLS AI