| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4388 |
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| Symbol | |
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| ID | 5749976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4804602 |
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| End bp | 4805264 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299491 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001565404 |
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| Protein GI | 160899822 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.81078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACA TCTCCCGGCT CCTTTCCGAC CACGGGCCTG CCTTCTGGCA GGCCCTCTTG
CTGACCTGGA AGCTCACCGC CTTCTCGTTC CTGCCCGGCT TCCTGCTGGG CGTGGTCGTG
ACGGTGCTCA GGCTGCTTCC GCTGCCGCCG CTGCGCTTCG TGCTGACGGG CTACGTCGAG
ATCTTCCGCA ACATTCCCAG CGTGGCGCTG CTGATCTTCA TCGTGTTCGC GCTGCCCGAT
CTCAATGTCG TGATCGACTA TGAACCCAGC GTGATCCTGG CCCTGACCCT GGTCTGCTCC
GCGTTCACGG CGGACTATCT GCGCGCGGGC ATCAACACCA TTGCCGGCAG CCAGATCGAG
GCCGCGCTCA GCCTGGGCAT GCGGCCCATG CAGATCATCT CGGCCGTGGT GCTGCCGCAG
GCGCTGCGCT CGGTGGTGCA GCCGATGACG TCGCTGCTCA TTGCGCTGAT GCTGTCCACC
TCGCTGGCGT CCCAGGTGCC GCTGGCGGGC CGGGAGCTCA CGGCGCTCGT GTCCAAGATC
GCCAACGACT CCGCTGCCGG CATGGCCGCG TTCGCGGTGG CCGCCGCCCT GTACGTGGCC
ACCGGATTGC TCATTGCCTG GGTGGGCGCC ATCCTGGAAA AGAAGCTGCG GATACTGCGA
TGA
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| Protein sequence | MGDISRLLSD HGPAFWQALL LTWKLTAFSF LPGFLLGVVV TVLRLLPLPP LRFVLTGYVE
IFRNIPSVAL LIFIVFALPD LNVVIDYEPS VILALTLVCS AFTADYLRAG INTIAGSQIE
AALSLGMRPM QIISAVVLPQ ALRSVVQPMT SLLIALMLST SLASQVPLAG RELTALVSKI
ANDSAAGMAA FAVAAALYVA TGLLIAWVGA ILEKKLRILR
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