Gene Daci_4385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4385 
Symbol 
ID5749973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4801589 
End bp4802194 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID641299488 
ProductTetR family transcriptional regulator 
Protein accessionYP_001565401 
Protein GI160899819 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA TCATGCGAAA CACAAATTCC AGCGCCCGGG CTTCCGCCAA GGAGGCCACG 
CATGAGCGCA TCGTGTCCGT GGCGGCGCGT GCCATCCGCC GCAGCGGCTA TGGCGGCACC
GGGGTGGCGG ACATCATGAA GGAGGCGGGC CTGACGCACG GCGCCTTCTA CGCCCATTTC
GCCTCGCGCG ATGCCATGCT GGCCGAAGCG GCGGGCAAGG CCTGCGCCGA GTCCTGCGCC
GCTGTCGCCG ACGTGGTGGC CAAGGCGCCG CCCGGCATGG TGCTGCAGGC CATGCTGGCC
GCCTACCTTT CCAAGGAACA TGTCCAGCGC GCCGAGGTGG GCTGCCCCCT GGCGGCCCTG
GGTTCCGAGA CCTCGCGCCA GGCGCCGGAG GTGCGCCGCG TGGCCACGGG CCACATCAAG
GAAATGGTCG ATCTCATCGC CCGCCAATCG CCGGACTGGG GACAGCCCGC CGCCCATGAA
CGTGCGCTGG TCACCTTGTC CACCATGGTC GGCAGCCTGC TGCTGGCACG GGCGGTGGAC
GATCCGGCCC TGTCCGACAG CCTGCGCGAG GCAGCACTCA AGCACCTGGC GCCGGCCAGC
CAGTGA
 
Protein sequence
MMTIMRNTNS SARASAKEAT HERIVSVAAR AIRRSGYGGT GVADIMKEAG LTHGAFYAHF 
ASRDAMLAEA AGKACAESCA AVADVVAKAP PGMVLQAMLA AYLSKEHVQR AEVGCPLAAL
GSETSRQAPE VRRVATGHIK EMVDLIARQS PDWGQPAAHE RALVTLSTMV GSLLLARAVD
DPALSDSLRE AALKHLAPAS Q