Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4365 |
Symbol | |
ID | 5749953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4778667 |
End bp | 4782863 |
Gene Length | 4197 bp |
Protein Length | 1398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641299468 |
Product | serine/threonine protein kinase |
Protein accession | YP_001565381 |
Protein GI | 160899799 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG3899] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.161943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.271622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCATTCGG ACGTACGCTA TAGTAACGAA CGGTATCAAA AGCACGGTCT GCCGTATGAC AAATGGACGA CTGGATACCC TCCAGGAGGA CCCCCAACCG AGGCTGAAAT GCACGATGCC ATCACCAACC CCACGCAAGC TGCGGTGACC CCGGTGGCGC CAGCCCCCCT GGAAATACCC GATTACGAAC TGCTGGAAAC CTTGGGATCG GGTGGCTACG GCACCGTCTA CCGCGCGCGC CACCGGCGCA CGGGTGCATC GGTGGCCATC AAGGTCGTCA GGCTGCAGGA AGGCGGCCGC CAGGTGGAGC GCTTCCACCG CGAGACCATG CTGTGCGCGT CCCTGCACCA TCCGCACATC GTCCAGTTGC TGGACAAGGG CGAGCAAGGC GACTGCGTCT ACGGCGTCTT CGAATATGTG CCCGGCGAGA CCCTCAAAAG CCTGATCCGC CGCCAGGGCG TGCTGACGGC GGCCGAGGCC GGCCGCCTCA TGGCCGAGGT GCTCGATGCG CTGGACTGCG CGCATGCCGC CGGCATCGTG CACCGCGACC TCAAGCCTGA CAACGTGATG GTCACCTCCA CGGGCGCCGT GCGGCACGCC ATGGTTCTGG ACTTCGGCAT CGGCACCGTC ATTCCGCAGT TTGCCGGCCC GCAGGTCTCG CAGCTCACCA TGGGCGACGA GTGCCTGGGC ACGCCTGCCT ACAGCGCCCC CGAGCAGCTG CGCGGCGAGC CGCCCAGCGC CCGCACCGAC CTGTATGCCT GGGGGCTGAT GTTCCTTGAA TGCCTGACGG GCACGCCCGC CGTGCAGGGT GCCTCGGTGG CCGAGATCGT GCACCGCCAG CTCAGCCCGC AGGAAGTGCA GCTGCCGCCG GCCATCTCCA CCCACCCCAT CGCCACCTTG CTGCGCAAGG CGCTCAAGAA GCGGCCCGCG GAGCGCAGCG ACTCGGCGGC GGCCCTGCTC AGGGACCTCA TGCGCGTGCG GCTGGACGAT CTGGTGGGCC AGTTGCCCGC CGCCGCCCAG GTGCAGCAGG CGGACCTGAC ACGCACCGTG GCCACCACAC GGGTGTTCTC CGAAGTGCGC CAGCTCACCG TGCTGTGCTG CAGCGTCTCC CTCTGGCCGG GCAGCGATAC CCACGGCATG GACGGCACGA CGGGCACCTC AAGCCAGCCC TCGCAGGGGC TGAACATCGA AGACATCGAA CTGCTGCAGC GCGAGGAACT CACGCTGTTC TCCGACGTTG CCACCCGGCG CGGAGGCATG CTGGCGGGCA CGCTGGGCGA CCGCATGCTG GTGCTCTTCG GCTACCCGCA CACCAGCGAC ACCGATGCCC GCCAGGCCGG CATGACGGCG CAGGAGCTGC TGACGCTCAG CCGCAGCCGC GCGGCCGCCA TCGAGCAGGT CCACGGACTG CACCTGGGAA TCCGCATGGG CCTGCACACC GGCATGGCCG TGGTGGTCGG CGGCGAAGCG CCCTCGGGCC ATGCCGTCAA CGTGGCCATG CGGCTGGAGG CCATCGCCGA TGCGGGCACC CTGCTGGCCA GCGAAAGCAG CCATCGCCTG CTGGCCCGCC ATGCGCGCTT CGAGAAAGCC GGCAGCCTGC GCCTGCCCGG CCAGCCCACG GGCATGCAGA CCTATCGCCT GGAGCTGGAA CAGCCGGCCG AGCCACTGCC AGGGCCTGTG TCCGATGCGG CCTTGCAGTG CATAGGCCGC GAACCCGAAC TGCAGCGCCT GCACGACGCA TGGGCGCGGG CCCGCGAAGC AGGGGGCAAT GCGCTGTGGA TTCGCGGCGA GCCGGGCATC GGCAAATCCT GCCTGGCCGA CATGCTGCTC GTCCACGCCA GGGCACAGGG CGCAAACACC GTGGTGCTGC AATGCCAGCC CGAGCACCGC AACACCGCGC TGACCCCTTT CCTGGGCCTG ATACGGCAGC GGCTGGAGTC GGCCGATCCC CCGCAGGACC ACCGCGAGCA GATGCGCGAA GCCCTGCGCG CCGCAGGCTG CGATGCCGAG GCCGCCCTGC CCATTCTGTG CGCCTGGCTC TCGCTGCCCC TGGGCGACTG CGAGCCCAGC CGCATCTCGG CCGTCATGCA AAGGGCGCTG CTGCTGCAGT CCACCGCGCA ATGGCTGCTG CACATGTCCG AAGCCGAGCC CCTGCTGCTG GTCGTCGAAG ACGTGCACTG GGCCGACCCC ACCAGCATCG AACTGCTGGA GCAACTGGTA GCGCGCCTGC CCGGGCGGCG CGTGCTGCTG GTGCTGACGG CGCGGCCGCA ATGGCAGCCG CCCGAAGGCC TGCAGGCCGA GTGCGTGGAC GTGCGGCGCC TGGAAGACGC CCAGGCCACC GAGCTGGCCC GCCAGACGCT GGCGCCGCGC AGGCTCAGCC CCGCCGTGAT CCGCCACGTG GTGGAGCGCA CCGACGGCGT GCCGCTGTTC ATCCAGGAAA TGGCGCGCAT GCTGCTGGAT GCCCACCTGG TGGAGCAGGA CGGCGTCTGG GACTTTCGCC ATGCCGGGCT GCCGGCCGCC ATTCCGCTGA CCCTGCGCGA CTCGCTGGTC AGCCGCTTTG ACCGCATCGG CCCGCTCAAG CCGCTGCTGC AACTGGCCGC CACCATGGGC CGGCACTTCG ACTTCGGCCT GCTGTGCGCC TGCGTGGAAC GCCCGCAAGG CGAGGTCGAG CAGGAACTGG CGCAGCTGGG CCAGGCCGGC CTGGTCATTG CCGATGAACG TGCGGGCGCC GGCGCCTTCA TGTTCCGCCA CGCGCTGATC CGCGATACGG CCTACGAATG CATGCTGGCA TCGCAGCGCC GGCTGCTGCA CCGCGACGTG GCCCTGGCCC TGATGCAGCA CCAGCCCCAG CGCGTTGCCG CAGAACCCGC AGGCGTGGCC CAGCACTGGG CAGACGCGGG CGACCATGCC CAGGCCGTGG CGCTTGCGGT GCGGCAGTTG CGCATCACGC AGCTGCGCTC GCTCAACGAT GAAACCATTG CCTACGCGCG CCACATCGAC GACTGGCTGC ACCAGCTCCA GGGCGTGGCC CAGCGCGAGG CGCGGCTGGA CGTCAACAGC TACGTGACCC AGGCGCTGAT GAACAAGCAC GGCTGGGCCC ATGCCCAGGT GGTGGAAAGC ATCGCGCTGT CGCAGGAGCT GCTGGCCGGC CCCGGCGCCA ACGCGGTGGC CGACTACAAG CAGGTGCAGC ACCTGTGGAT GCTGATCACC TACCACCATG TGGCCAGCAA CCGCGAGGAA GTGCGCCAGC TCAGCCGCCG CCTGCTGGAG CAGGCCGTGC GCCAGCAGGA CACGGGCGTG CTGGTGGCCG CGCAGACCTA CCTGGGCCTG GCCCACTACT CCGACGGCCG ATTCGAGCAG GCCGAAGAAG CGCTGACCGA CGCCATCACC CGCTACGACC CCGTGGCCCA TGCCCACCAT GCGGCCGAGT TCGGCTTCGA CACGCGCGTC TGGGCCACCT GCGGGCGCGC CCTGGTGCGC TGGTTCGCCG GCTTCGACCA GGCCGCGCTG GCCGATGCGA ACGACGCCGT GCGCCTGGCG CACGAGGTCT CGCACATCCC CTCCCTGAGC ATGGCCCTGC TCTACCAGGC CCTGGTCCAC CAGGCGCGTG GCGACAAGGA AAGCGCCTTG GCCACCACGG GCGAGCTGCT GGACATCACG GCCCGCTACG GCCTGCCCGC GTTCTCGGGC TATGCGGACA TCATCCGCTG CTGGGCGCTG GGTGACAGCG CAGGCAGCGC CAGCGCCGAG GGCATTGAAC GCGCCAGCGG CACGGCGCAG CTGCTCTGGG ACATGGGCTG CCGCTACTGC CAGACCTACT ACCGCTCCTT CGTCGCCGAA ATGCTGGCGG CCAGCGGGCG CTGGACCGAA GCCCTGGACA AGATCGACGA ATGCCTGCGC CTGGCCGACG TGCTGGACGA ACGGCTGCAC AGCAGCGAGC TGCACCTGAA GAAGGCCCGC TTCCTGCTGG CCATGGGCGC CGACCACGCA GCCGTGCAGG ACAGCCTGGC CCAGGCGGCA GGGACTGCGC GCACCGCCGG CAAGCACCGC ACCGAAACCG AGGCGCTGGT CCTGTCGCTG GCCCTGGCAC CCGCCAGGCC GGACGTGGCC GCGCGCCTGA GTGAGCTGGC CGCATTGCGG CCTGAACTGT CCGTGCTCCT GTCCGGGCCT CTGCCCGGCC AGGCGCATTT ATCTTGA
|
Protein sequence | MHSDVRYSNE RYQKHGLPYD KWTTGYPPGG PPTEAEMHDA ITNPTQAAVT PVAPAPLEIP DYELLETLGS GGYGTVYRAR HRRTGASVAI KVVRLQEGGR QVERFHRETM LCASLHHPHI VQLLDKGEQG DCVYGVFEYV PGETLKSLIR RQGVLTAAEA GRLMAEVLDA LDCAHAAGIV HRDLKPDNVM VTSTGAVRHA MVLDFGIGTV IPQFAGPQVS QLTMGDECLG TPAYSAPEQL RGEPPSARTD LYAWGLMFLE CLTGTPAVQG ASVAEIVHRQ LSPQEVQLPP AISTHPIATL LRKALKKRPA ERSDSAAALL RDLMRVRLDD LVGQLPAAAQ VQQADLTRTV ATTRVFSEVR QLTVLCCSVS LWPGSDTHGM DGTTGTSSQP SQGLNIEDIE LLQREELTLF SDVATRRGGM LAGTLGDRML VLFGYPHTSD TDARQAGMTA QELLTLSRSR AAAIEQVHGL HLGIRMGLHT GMAVVVGGEA PSGHAVNVAM RLEAIADAGT LLASESSHRL LARHARFEKA GSLRLPGQPT GMQTYRLELE QPAEPLPGPV SDAALQCIGR EPELQRLHDA WARAREAGGN ALWIRGEPGI GKSCLADMLL VHARAQGANT VVLQCQPEHR NTALTPFLGL IRQRLESADP PQDHREQMRE ALRAAGCDAE AALPILCAWL SLPLGDCEPS RISAVMQRAL LLQSTAQWLL HMSEAEPLLL VVEDVHWADP TSIELLEQLV ARLPGRRVLL VLTARPQWQP PEGLQAECVD VRRLEDAQAT ELARQTLAPR RLSPAVIRHV VERTDGVPLF IQEMARMLLD AHLVEQDGVW DFRHAGLPAA IPLTLRDSLV SRFDRIGPLK PLLQLAATMG RHFDFGLLCA CVERPQGEVE QELAQLGQAG LVIADERAGA GAFMFRHALI RDTAYECMLA SQRRLLHRDV ALALMQHQPQ RVAAEPAGVA QHWADAGDHA QAVALAVRQL RITQLRSLND ETIAYARHID DWLHQLQGVA QREARLDVNS YVTQALMNKH GWAHAQVVES IALSQELLAG PGANAVADYK QVQHLWMLIT YHHVASNREE VRQLSRRLLE QAVRQQDTGV LVAAQTYLGL AHYSDGRFEQ AEEALTDAIT RYDPVAHAHH AAEFGFDTRV WATCGRALVR WFAGFDQAAL ADANDAVRLA HEVSHIPSLS MALLYQALVH QARGDKESAL ATTGELLDIT ARYGLPAFSG YADIIRCWAL GDSAGSASAE GIERASGTAQ LLWDMGCRYC QTYYRSFVAE MLAASGRWTE ALDKIDECLR LADVLDERLH SSELHLKKAR FLLAMGADHA AVQDSLAQAA GTARTAGKHR TETEALVLSL ALAPARPDVA ARLSELAALR PELSVLLSGP LPGQAHLS
|
| |