Gene Daci_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4357 
Symbol 
ID5749945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4771301 
End bp4772083 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID641299460 
Producthypothetical protein 
Protein accessionYP_001565373 
Protein GI160899791 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.486067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.243171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACA TCACGTTTCC CCCTCCCTAT ATCGCCCCCC AGAATGCAGC GCAGTCGCTG 
CGCGACGCAG GCTATGCGGT GCTGCGCCCC GATGAATTCG CGGCCTGGAC AGGCGTGTCA
TTGACCGAGC TGCATGCGCT CGATGCCGAC TGGGCCCAGC TGCCGCCCGA TGCCTTTCTG
AAGGACGGCG GGCGCTACCG GCGCCGCCGC CATTCCTGCT TCATCGCCGG GCAGGACGGG
CTGCAGCAGG TGGAGCACCG CGCGCACTGG CAGCCGGTGG AATACAACGC CCTGCATGGC
GGCATGCTGC GCATGTTCGA TCCCATGCGC GACGCCACGG CGCAAAGCGC CACCTGGAGC
CGGCTGCTGC TGGCGCTGGC CGGCCTGTCC GACCAGGTGT TCTGCGCCCG GGGCAACGAT
GTGCAGCACG AGCGCTGGTT CATCGAGTCC CACCAGTTCC GCATCGACAC CACGGACGGC
ATTGGCCGGC CCACGCCCGA AGGCGCGCAC CGCGACGGCG TGGACCTGGT GGCGGTGATC
CTGGTCGGGC GCGAGGGCGT GAAGGGCGGC GAGACACGCA TCTTCGAGGC CACGGGCCCC
AGCGGCCAGC GCTTCACGCT GACCGAGCCC TGGTCGGTGA TGCTGCTGGA CGATGCCCGC
ATGATCCACG AGACCACGCC CATCCAGCCC GAGCAGCCGG GCGGCGTGCG CGATACCCTG
GTGCTGACCT ATCGCCGCCA GGGTTTCCAG GGCTCGGAGC TGACGCGTCG CCGCAAGGAT
TGA
 
Protein sequence
MAHITFPPPY IAPQNAAQSL RDAGYAVLRP DEFAAWTGVS LTELHALDAD WAQLPPDAFL 
KDGGRYRRRR HSCFIAGQDG LQQVEHRAHW QPVEYNALHG GMLRMFDPMR DATAQSATWS
RLLLALAGLS DQVFCARGND VQHERWFIES HQFRIDTTDG IGRPTPEGAH RDGVDLVAVI
LVGREGVKGG ETRIFEATGP SGQRFTLTEP WSVMLLDDAR MIHETTPIQP EQPGGVRDTL
VLTYRRQGFQ GSELTRRRKD