Gene Daci_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4356 
Symbol 
ID5749944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4770764 
End bp4771201 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID641299459 
ProductUspA domain-containing protein 
Protein accessionYP_001565372 
Protein GI160899790 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.244024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.219177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC ACATCCTGGT TCCCGTGGAC GGCTCCAACA GCTCGATGCT GGCGGTTCAC 
AAGGGCGTGG AGCTGGCCAA GGCCTTTGGC AGCACGCTGA CGGCGGTCTA CGTGGTGGAC
CCCTATCCGT TCACGGGCGT GGGCGCCGAC TTCGCCTACG GCCAGTCGCA GTACCTGAGC
GCGGCCACGG CCGAGGCCAA CACCACGCTG GACGCCGTCA AGAAGATCAC CGACGAGGCC
GGCATCACCG CCACCACCGT GGTGGGCGAA GGCCATGCGG TGCACGAAGG CATCGTGCGC
GTGCTCGAGA GCACGGGCGC CGACCTGATC ATCATGGGCT CGCAAGGCCG CCGTGGCCTG
GAAAAGCTGA TGCTGGGCAG CGTGACCCAG CGCGTGCTGG GCGCCGTGCG CGTGCCGGTG
CTGGTGGTGC GCGAGTAA
 
Protein sequence
MFKHILVPVD GSNSSMLAVH KGVELAKAFG STLTAVYVVD PYPFTGVGAD FAYGQSQYLS 
AATAEANTTL DAVKKITDEA GITATTVVGE GHAVHEGIVR VLESTGADLI IMGSQGRRGL
EKLMLGSVTQ RVLGAVRVPV LVVRE