Gene Daci_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4334 
SymbollivG 
ID5749922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4743800 
End bp4744567 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID641299437 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_001565350 
Protein GI160899768 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.231493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.133886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT ATTTGCTAGA AGTCAAAGAC CTGTGCATGC GCTTCGGCGG CCTGCTGGCC 
GTGGACCATG TGGGCTTCAA CGTGCGCCCG CAGGAAGTGT TTGCCATCAT CGGCCCCAAC
GGCGCCGGCA AGACCACGGT GTTCAACTGC ATCAGCGGTT TCTACCAGCC CAGCAGCGGC
TCCGTCACGC TGGACGGCAG CGCCATCGAG GGCCGCAGCA GCCACCACGT GGCCAACCAC
GGAGTGGTGC GCACCTTCCA GAACGTGCGG CTGTTCAAGT CCATGACGGT GCTGGAAAAC
CTGCTGGTGG CACAGCACCG CCGCTCAGGC GTCAACCTGC TGTCGGGCCT GTTCAACACG
GCAAGCTACC GCCGCAGCGA AGAGGAAAAG ATCGAGAGCG CCCTGCACTG GCTGGACGTC
ATGGGCCTGC GCGAGTTCGT CAACCGCGAG GCCGGCAACC TGGCCTACGG CCACCAGCGC
CGCCTGGAGA TCGCGCGGTG CATGATCACC AAGCCGCGCG TGCTCATGCT CGACGAACCG
GCCGCCGGCC TGAACCCGCA GGAGAAGAAG GACCTGCAGG GCCTGATCGA CCAGCTGCGA
CGCCAGTACG GCATTGCCGT GCTGCTGATC GAGCACGACA TGGGCCTGGT CATGGGCGTG
TCCGAGCGCA TCCTCGTCAT GGAGTACGGC AAACCCATCG CCATGGGCCT GCCGGATGCC
ATCCGCAACG ATGAACGGGT CATCAAGGCC TACCTGGGAG AAGCCTGA
 
Protein sequence
MSEYLLEVKD LCMRFGGLLA VDHVGFNVRP QEVFAIIGPN GAGKTTVFNC ISGFYQPSSG 
SVTLDGSAIE GRSSHHVANH GVVRTFQNVR LFKSMTVLEN LLVAQHRRSG VNLLSGLFNT
ASYRRSEEEK IESALHWLDV MGLREFVNRE AGNLAYGHQR RLEIARCMIT KPRVLMLDEP
AAGLNPQEKK DLQGLIDQLR RQYGIAVLLI EHDMGLVMGV SERILVMEYG KPIAMGLPDA
IRNDERVIKA YLGEA