Gene Daci_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4332 
Symbol 
ID5749920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4741583 
End bp4742509 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID641299435 
Productinner-membrane translocator 
Protein accessionYP_001565348 
Protein GI160899766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.797929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.146471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC TCTTACCTCA GCTGATACAG CAGCTGTTCA ACGGACTGTC CCTGGGCGCC 
ATCTATGCCC TGATCGCCAT CGGCTACACA ATGGTCTACG GCATCATCGG GATGATCAAC
TTCGCCCACG GCGACATCTA CATGATCGGC GCCTACATCG GCCTGGTCAC GCTGTCGGCC
ATCGGCACGA CAAGCGGCCT GCCCGTGTGG GCCATCATCG GCCTGATGCT GGTGGTGTCG
GTCTTCGTCA CCGGCGTCTA CGGCCTGGTG GTGGAACAGG TGGCCTACAA GCCGCTGCGC
CGCAGCCCCC GCCTGGTGGC CCTGATCTCG GCCATCGGCA TGTCCATCTT CCTGCAGAAC
TGGGTGGCCC TGGGCCAGGG CGCGCGCGAC ATGGCCGTGC CCTCGCTGCT GCCCGGCGCG
CTGCGTTTCG GCGCCGAAGG TGGCTTCGAG ATCTATGTGC CCTACTCGCG CATCCTGATC
ATCGTGGTCG CCATCGTGCT CATGGTGCTG CTGACGCTGT ACATCCGCCA TTCCCGCATG
GGCCGTGCCT CGCGCGCCTG CGCCCAGGAC ATGCACATGG CCAGCCTGCT GGGCATCGAC
ACCAACCGCG TGATCTCGTT CACCTTCGTG CTCGGCGCCA TGCTGGCAGC CGTGGGCGGC
GTGCTGATCG CGCTGGCCGT GGGCAAGCTC AACCCGTTCA TCGGCTTTCT GGCCGGCATC
AAGGCCTTCA CGGCGGCGGT GCTGGGCGGC ATCGGCTCCA TCCCCGGCGC CATGCTGGGC
GGCGTGCTGC TGGGCGTGGC CGAGACCTTT GCGGCAGCCT ACATCTCGTC CGAGTACAAG
GACATCGTGG CCTTCGGCCT GCTGGTGCTG ATCCTGCTGT TCCGCCCCAC GGGCCTGCTG
GGCAAGCCTG AAGTGGAGAA GGTCTGA
 
Protein sequence
MSELLPQLIQ QLFNGLSLGA IYALIAIGYT MVYGIIGMIN FAHGDIYMIG AYIGLVTLSA 
IGTTSGLPVW AIIGLMLVVS VFVTGVYGLV VEQVAYKPLR RSPRLVALIS AIGMSIFLQN
WVALGQGARD MAVPSLLPGA LRFGAEGGFE IYVPYSRILI IVVAIVLMVL LTLYIRHSRM
GRASRACAQD MHMASLLGID TNRVISFTFV LGAMLAAVGG VLIALAVGKL NPFIGFLAGI
KAFTAAVLGG IGSIPGAMLG GVLLGVAETF AAAYISSEYK DIVAFGLLVL ILLFRPTGLL
GKPEVEKV