Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4331 |
Symbol | |
ID | 5749919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4740364 |
End bp | 4741485 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641299434 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001565347 |
Protein GI | 160899765 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0730184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CGTTCCGCAT GCACACCGTC GTCGCCGCCC TGGGTTTGGC TGGTGCCGCC TTGTTCTCCA CAGCGCATGC GCAAATCAAG ATCGCCATGG TGGTTCCCAC CACTGGCCCG CTGACGCAGT ACGGCGACAT GGTCAAGGAA GGCGTGAACA CCGCCGTGGA AATGGCCAAT GCGGCTGGCG GCGTCAATGG CAAGAAGATC GAGCTGGTGT CCGTCGATGA CGCCTGCGAA CCCAAGCAAG GCCCCGTGGC CGCCAACCGC GTGGTCAACG CCAAGATCGG CTACGTGATC GGCCCCGTCT GCTCGGGCGC ATCGATTGCC GCCGCCCCGA TCTACAACAA CGAAGGCGTG GTCGTCGTGA CCCCCTCGGC CACCTCCCCG GCCCTGACCG ACGGCAAGAA CTACCACTTC ATCTTCCGCA CCATCGGCCG CGATGACCAG CAGGGCCCGG CCGCCGCCAA GTTCATCCTG GACAAGGCCA AGCCCAAGAA GGTTGCCGTG CTGCACGACA AGCAGTCGTA TGGCCAGGGC ATTGCCTCCT CCGTGCGCGA CGACCTGAAG AAGGCCGGCG TGGAAGTGGC CCTGTTCGAA GGCATCAACG CCGGCGACAG CGACTACTCC GCCGTCATCA CCAAGCTCAA GAGCGCCGGT GTGGACTTCG TCTACTACGG CGGCTACCAC CCTGAAATGG GCCTGCTGCT GCGCCAGGCT TCCGAGCAGG GTCTGAAGGT CCGCATGATG GGTCCCGAAG GCGTGGGCAA CCCCGAAGTC AACGCCATCG CCGGCAACGC CGTCGAAGGC ATGCTGGTGA CCCTGCCTGC AGACTTCTCG GCCAACCCCA AGAACGCCGC CGTGGTCAAG GCCTTCAAGG ACAAGAAGCG CAATCCCTCG GGCGCCTTCC AGCTGACCGC CTTTGCCGCC ACGCAAGTGC TGCTGGACAG CATCAAGGCC GTGGGCGACA GCCCCGCCAA GGTGGCTGAC CACCTGCACA AGTCCAACTT CGAGACCGTT CTGGGCTCGG TGGGCTGGAA CAAGCAGGGC GACCTGAAGT CCTTCGACTT CCAGGTGTTC GAATGGCACA AGGACGGCAG CAAGTCGGTC GCTGCCAAGT AA
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Protein sequence | MSIPFRMHTV VAALGLAGAA LFSTAHAQIK IAMVVPTTGP LTQYGDMVKE GVNTAVEMAN AAGGVNGKKI ELVSVDDACE PKQGPVAANR VVNAKIGYVI GPVCSGASIA AAPIYNNEGV VVVTPSATSP ALTDGKNYHF IFRTIGRDDQ QGPAAAKFIL DKAKPKKVAV LHDKQSYGQG IASSVRDDLK KAGVEVALFE GINAGDSDYS AVITKLKSAG VDFVYYGGYH PEMGLLLRQA SEQGLKVRMM GPEGVGNPEV NAIAGNAVEG MLVTLPADFS ANPKNAAVVK AFKDKKRNPS GAFQLTAFAA TQVLLDSIKA VGDSPAKVAD HLHKSNFETV LGSVGWNKQG DLKSFDFQVF EWHKDGSKSV AAK
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