Gene Daci_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4327 
Symbol 
ID5749915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4733570 
End bp4733944 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content66% 
IMG OID641299430 
Productglycine cleavage system H protein 
Protein accessionYP_001565343 
Protein GI160899761 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.124977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0484045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC AGTATTCCAA GGACCACGAA TGGATCAACG CCGCCAACCC TGACGCGGCC 
ATCGTCGGCA TCACCCTCCA CGCGCAGGAT GCGCTGGGCG ACGTGGTGTT CGTCGATCTG
CCCGCCGTGG GCACCAGCTT CAACCAGGGC GATGTGGCCG GCGTGGTCGA GTCCGTCAAG
GCCGCCGCCG ATGTCTACAT GCCCGTCAGC GGCGAGATCG TCGAAGTCAA CGAAGCCCTG
CGCGACGACC CCTCCCTGGC CAACAGCGAC CCGCTGGGCG AAGGCTGGTT CTTCAAGGTC
AAGCTCAGCG ACGCAGGCCA GCTGGCCGCG CTGCTCGACG AAGCCGCCTA CACGGCCTTC
GCACAGAGCA ACTGA
 
Protein sequence
MSIQYSKDHE WINAANPDAA IVGITLHAQD ALGDVVFVDL PAVGTSFNQG DVAGVVESVK 
AAADVYMPVS GEIVEVNEAL RDDPSLANSD PLGEGWFFKV KLSDAGQLAA LLDEAAYTAF
AQSN