Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4316 |
Symbol | |
ID | 5749904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4720640 |
End bp | 4722100 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641299419 |
Product | major facilitator transporter |
Protein accession | YP_001565332 |
Protein GI | 160899750 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.444019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATGA CCGATTCCCC CGGCGCCCTG CGCCACCCGC GCGCCGCCCT GGCGCTGCTG TCCCTGTCCC AGCTGCTGAT TGCGCTGGAT GCCACCATCG TCTTCGTTGC GCTCGACGCC ATGGGCCAGC AGCTGCAGAT GGACGCGCAC CATCTGCAAT GGGTGGTCAG TGCCTACAGC GTGGCCTTTG GCGGCTGCCT GCTGCTGGGC GGGCGCTGCG CGGACCTGCT GGGCAAGCGG CGCATGTATG TGGCGGGCAT GGCGCTGTTC GGCCTGGCCT CCCTGGTCGG CGGCTTTGCC TCGCAGCCCT GGCAACTGGT GCTGGGCCGC GCAGGGCAGG GCGTGGCCGG GGCGCTGCTG TTTCCGGCCA CGCTGTCGCT GATCAACACC TTGTATGCGG CAGGGCCCGA GCGCAACCGC GCCCTGGCCG TGTGGAGCAT GGCGTCGGCC GGCGGGCTGG CGGCCGGCGC GCTGCTGGGC GGCGTGCTCA CGCAGACGCT GGGCTGGAAC TGGGTGCTGT GGGTGCTGGT GCCCGTGGCC TGGCCGTGTG CCATGGCGGC GCTGCGCTTT CTGCCGCCCT CGGCCCAGAC CGGGCGCGCC GCGCCGGGCC AGGGCTTCGA TCTGGCCGGC TGCCTGAGCG TGACCGTGGG CAGCAGCCTG CTGGTGACGG CCCTGGTGCA AGGCCCTGAA TGGGGCTTTG CCAGCGCCGC CACGCTGGGG ACGCTGGCCG TGGCGATCGC GGCGTTGGCG CTGTTCTGGC GCATCGAGGC GCGTATTGCC TCGCCGCTGA TGCCGCTGTC CCTGCTGCGC GTGCCCAGCC TGCGCGCGGC CATGCTGCTG ACCATGATCT TCATGAGCAG CTTTGGCGTG CAGTACTACT TCCTGGCGCT GTACTTCCAG CAGATCTTCG GCTGGAGCCC GCTGCAGGCC GGCATGGCCT TTTTGCTGCC CACGGCGGTC TGCACGCTGG GCATCCGCTG GGCCGAACAC TGGCTGCACC GCTCCACGCC GCGCGCCGTG CTGATGGGGG GCTGGGCCGC AGGCACCATC GGCCTGGCCT ACATGGCCTG GGCGCTGCCG CTGGGCGGCA GCTATGTCTG GCTGGTGCCC GGCTTCGTGG TGCTCAGCCT GGGCCAGGGC GCGTGCTGGA CCGCCATGTG GGTGGTGGCC GGCCAGGGCG TGGCGGCTGC GCAGCAGGGC GTGGCCTCGG GCATTGCGGC CACGGCCCAG CAAGTGGGCG CGGCACTGGG GTTGGCCCTG CTGGTCATGG TGGCCACGGC GCCGCTGGCC GGCATCACGG CGCCCGATGC GCTGCGCGAG GCCACGGCCC GGGGGCTGCA GCAGGCCGAA TGGGGTGCTG CACTTATCGC GCTGCTGGGG TGGGTGGTGT CTGCGGGCAT GCGCCGCGCA CCGGCAAGCC AGGCCGTGCC GGGCGCGGAG CAGCCGGCCT GCTCGCCTTG A
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Protein sequence | MPMTDSPGAL RHPRAALALL SLSQLLIALD ATIVFVALDA MGQQLQMDAH HLQWVVSAYS VAFGGCLLLG GRCADLLGKR RMYVAGMALF GLASLVGGFA SQPWQLVLGR AGQGVAGALL FPATLSLINT LYAAGPERNR ALAVWSMASA GGLAAGALLG GVLTQTLGWN WVLWVLVPVA WPCAMAALRF LPPSAQTGRA APGQGFDLAG CLSVTVGSSL LVTALVQGPE WGFASAATLG TLAVAIAALA LFWRIEARIA SPLMPLSLLR VPSLRAAMLL TMIFMSSFGV QYYFLALYFQ QIFGWSPLQA GMAFLLPTAV CTLGIRWAEH WLHRSTPRAV LMGGWAAGTI GLAYMAWALP LGGSYVWLVP GFVVLSLGQG ACWTAMWVVA GQGVAAAQQG VASGIAATAQ QVGAALGLAL LVMVATAPLA GITAPDALRE ATARGLQQAE WGAALIALLG WVVSAGMRRA PASQAVPGAE QPACSP
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