Gene Daci_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4313 
Symbol 
ID5749901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4718442 
End bp4719236 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID641299416 
ProductABC transporter related 
Protein accessionYP_001565329 
Protein GI160899747 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.887716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CACAACAACT CGAAATCACC TTCAACCCCG GCACGCCCAT CGAAACGCGG 
GCGCTGCGCG GCATGTCGCT GGACATTCCC GACGGCCAGT TCGTCACCGT CATCGGCTCC
AACGGCGCCG GCAAGTCCAC CTTCCTGAAC GCCGTCTCGG GCGACCTGTC CGTGGACAAG
GGCCGCATCG AGATCGCCGG CCAGGACATG ACGCGCCTGC CCGTGTGGGC ACGTTCCGAA
CGCGTGGCCC GCGTCTTCCA GGACCCCATG GCGGGCACCT GCGAGGACCT GACCATCGAG
GAAAACATGG CCCTCGCCCA GCGCCGCGGC ACCTTCCGCC GCCTGAGCCG CGCCGTCAAG
GCCGAGATGC GCGACAACTT CCGCGAGCGC CTGTCCATCC TGGGCCTGGG CCTGGAAAAC
CGCCTGACCG ACCGCATCGG CCTGCTCTCT GGCGGCCAGC GCCAGGCCGT GAGCCTGCTG
ATGGCGGCGC TGCAGCCTTC GCGCATCCTG CTGCTGGACG AGCACACCGC CGCGCTCGAC
CCGCGCACGG CCGACTTCGT GCTGCAGCTG ACGGCGCGCA TCGTCTCCGA GGCCAAGCTC
ACCACCATGA TGGTCACCCA CAGCATGCGC CAGGCGCTGG ACGTGGGCGA GCGCACGGTG
ATGCTGCACC AGGGCCAGGT CGTGCTCGAC GTCAGCGGCG AGGAACGCGC CCGCATGGAC
GTGCCCGACC TGCTGCACAT GTTCGAGAAG GTACGCGGCG AAAAGCTGGC CGACGACGCA
CTGCTGCTCG GCTGA
 
Protein sequence
MLSAQQLEIT FNPGTPIETR ALRGMSLDIP DGQFVTVIGS NGAGKSTFLN AVSGDLSVDK 
GRIEIAGQDM TRLPVWARSE RVARVFQDPM AGTCEDLTIE ENMALAQRRG TFRRLSRAVK
AEMRDNFRER LSILGLGLEN RLTDRIGLLS GGQRQAVSLL MAALQPSRIL LLDEHTAALD
PRTADFVLQL TARIVSEAKL TTMMVTHSMR QALDVGERTV MLHQGQVVLD VSGEERARMD
VPDLLHMFEK VRGEKLADDA LLLG