Gene Daci_4304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4304 
Symbol 
ID5749892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4708945 
End bp4709439 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content57% 
IMG OID641299407 
ProductMerR family transcriptional regulator 
Protein accessionYP_001565320 
Protein GI160899738 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.614703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG GTGAACTGAG CAAACGCACA GGCCTGTCCA CATCACGCAT TCGTTTTTAT 
GAGCAAAGCG GCCTGCTGCA AGCGGCTGAG CGTGGCTTGA ATGGCTACCG CAGCTATCCG
CCTGAGATGG TGCAGATGCT GGAGCTGATT GCGATGGCGC AAGGCGTGGG CTTCAGCCTG
GATGAAATTC GTGCACTCTT GCCGCCCGGC CTGCAAGGCT GGGACCATGA GGCCGTCGTG
GGCGCGCTGC GCCAAAAAAT TGCCGATATC AAGGCCATGG AGAAAAAGCT GCAAACCAGC
AAAAAGCAGT TGCAGGCTTT GTTGACCGAT ATTGAAGCGC GGCCAGACAA CATGGATTGC
CACGACAACG CACGCCGCGT GCTCTCCCAT GTACTGGCCC AGCAATCCGA ATCCCTGGCC
TCTGAAGCAG CGGCCGAAGA AAAAATGGGC AAGCTCATGC GCACAGGACA CAAGAAGCGG
GCAAGCGTGG CATAG
 
Protein sequence
MNIGELSKRT GLSTSRIRFY EQSGLLQAAE RGLNGYRSYP PEMVQMLELI AMAQGVGFSL 
DEIRALLPPG LQGWDHEAVV GALRQKIADI KAMEKKLQTS KKQLQALLTD IEARPDNMDC
HDNARRVLSH VLAQQSESLA SEAAAEEKMG KLMRTGHKKR ASVA