| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4294 |
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| Symbol | |
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| ID | 5749882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4698941 |
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| End bp | 4700821 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641299397 |
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| Product | histidine kinase |
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| Protein accession | YP_001565310 |
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| Protein GI | 160899728 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0465122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC GCCGCCCCCT GCGCCAGCTC ATCCTGCTTT TGCTGTGGCT TGCCCTGAGC
GGGCTGAGCG GCTGGGGTGC GTACCTGCTG GCGCAGCGGC TGGGCATTGC CGATCTGCGT
GCCACGGGCA TGCACCGGCT GGAGCTGTAC GGCGCCAGCC TGCAGCGCGA GATCGGCAAG
TACGCCTTCC TGCCCGACGT GCTGGCACTG GAAGGCAATG TGCAAAGGCT GCTGGCCGAG
CCCGGCGACG AGCAGCTCAC CAACCGCGTC AACGCCTACC TGGAGCAGCT CAACGACCGC
GCGGGCACGC TGACCGCCTA CCTGGTCGAT GCGCGCGGCC ACGTCGTGGC CTCCAGCAAC
TGGCGGCGCT CCGACAGCTA CATGGGCGAG GACCTGAGCT TTCGCCCCTA CTACCGCACC
GCCATGGCCA CGGGCAGCGC GCGCTTCTTC GGCATAGGCA CCACGCGCGG CGAGCCCGGC
TACTACCTGG CCTCCACCCT GGGCGACGAC ACCCACACGC TGGGCGTGGC CGTGGTCAAG
GTCAGCCTGG ACCAGCTGGA GCAATCGTGG TCCACGGTGG AGGCGCCCGT GCTGGTGGGC
GACGAGAACG GCGTCGTCAT CCTGGGCACG GTCTCCGACT GGAAATTCAC CACCTTGCGC
ACGCTGGACG AGGGCACGCG CGCCGCCTTC GACCACACGC GCCAGTACAA CCGCCGCGCG
CTGGAGCCGC TGGGCCTGCA GGTGCTGCGC GACCTGGGCC AGGGCGCGCG CCTGGTGCGC
ATTGCCCGCC ATGGCGAGGA ATCGCCAGGC TCGGTCTACC CGGTCAGCGG CCGCTTCCTG
GCCCAGTCGC GCCAGCTGCC TGGCACGCCC TGGACGATCA CCGTGCTCTC GCACCTGGAG
CAGGTCGACC AGCTGGCCCA GAGCCGCGCG CTGGCCGCGG CCGTGGGCGC GGCCTTTGTG
TTGCTGCTGG CCATGATGGT CAACGAGCGC CGCCGCCACC TGCGCGACCG GCTGGCCGCG
CGCGAGGCTC TGCAGGCCGC GCACGACGAG CTCGAGCGCA AGGTGGAGCA GCGCACGGCC
GACCTGTCGG CCGCCAACGA GGCGCTGCAG GCCGAGGTGG CCGAGCGCAC CCACGCCGAG
GCCACGCTGC GCGCCGCCCA GGACGAACTG GTGCAGGCCG GCAAGCTGGC CGTGATAGGC
CAGCTGTCCA CGGGCGTGGC CCATGAACTC AATCAGCCGC TGACGGCGCT GCGCACCCTG
GCCGGCAACA GCCAGCGCTT TCTGGAGCGC GGCGATACCG AAACCACGCG CGTGAACCTG
GAGCGCATGG CGCAGCTGGC CGACCGCATG GGCCGCATCA CCGGCCAGTT GCGCAACTTC
GCGCGCAAGT CCAGCGGCGC CAGCCAGGCC GTGCCGCTGG CGCATGCGCT GGACAATGCG
CTGGCGGTGC TGGAGTCGCG CGTGGCCGAG ACCGGCGCCC GCATCCTGCG CGATGACGGC
GTGCCCGAGG CCGTGGCCTG GTGCGACCGC AACCGCATCG AGCAGGTGCT GATCAACCTG
ATCAACAACT CCCTGGACGC CATGCGCGGC CAGCCCGCGC CCTGCCTGGA GCTGGCCTGC
GCCGTGGCCG ATGGCCGCGC CCAGGTCACC GTGCGCGACC ACGGCCCTGG CCTGAGCGAA
GCGGCGCAGG CCCATCTGTT CCAGCCGTTC TTCACCACCA AGGAAGAGGG CGTGGGCCTG
GGCCTGGGGC TGGCGCTGTC GGCCGGCATC GTGCGTGAAT GCGGCGGCAC GCTGACGGGC
AGCAACCATC CGGGCGGCGG CGCCGTCTTC ACGCTGAGCC TGGCCCTGGC ACCCTCCACA
CCTTCTGCCG ACACACCATG A
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| Protein sequence | MPARRPLRQL ILLLLWLALS GLSGWGAYLL AQRLGIADLR ATGMHRLELY GASLQREIGK
YAFLPDVLAL EGNVQRLLAE PGDEQLTNRV NAYLEQLNDR AGTLTAYLVD ARGHVVASSN
WRRSDSYMGE DLSFRPYYRT AMATGSARFF GIGTTRGEPG YYLASTLGDD THTLGVAVVK
VSLDQLEQSW STVEAPVLVG DENGVVILGT VSDWKFTTLR TLDEGTRAAF DHTRQYNRRA
LEPLGLQVLR DLGQGARLVR IARHGEESPG SVYPVSGRFL AQSRQLPGTP WTITVLSHLE
QVDQLAQSRA LAAAVGAAFV LLLAMMVNER RRHLRDRLAA REALQAAHDE LERKVEQRTA
DLSAANEALQ AEVAERTHAE ATLRAAQDEL VQAGKLAVIG QLSTGVAHEL NQPLTALRTL
AGNSQRFLER GDTETTRVNL ERMAQLADRM GRITGQLRNF ARKSSGASQA VPLAHALDNA
LAVLESRVAE TGARILRDDG VPEAVAWCDR NRIEQVLINL INNSLDAMRG QPAPCLELAC
AVADGRAQVT VRDHGPGLSE AAQAHLFQPF FTTKEEGVGL GLGLALSAGI VRECGGTLTG
SNHPGGGAVF TLSLALAPST PSADTP
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