Gene Daci_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4293 
Symbol 
ID5749881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4697598 
End bp4698944 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID641299396 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001565309 
Protein GI160899727 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.475037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCTCAAAGT CCTGATCATC GAGGATGACC CCGACATCGT GCTCGGCTGC 
GAGCAGGCGC TGCAGCTCGA AGGTATCGCC TGCGAAAGCG TGGGCAGCGC CGAGCAGGCG
CGCCGGCGCC TGTCGCGCGA CTTCGCGGGC ATCGTGGTCA GCGACATCCG CCTGCCGCGC
ATGGACGGCA TGGCCTTTCT GCGCGAACTG GTGGCCATGG ATGCCGAGCT GCCCGTGGTG
CTGATCACCG GCCACGGCGA CATCTCCATG GCCGTACAGG CCATGAAGGA CGGCGCCCAG
GACTTCATCC AGAAACCCTT CGCCCCCGAA ACCCTGGTCG GCGCCGTGCG CCGCGCCCTG
GAGCGCCGGC GCCTGGTGCT GGAGGTGCGG GCGCTGCGTC AGCAGCTGGA CCAGCGCGAC
AGCCTGGAGC ACCGGCTGAT AGGCCGCGCG CCCAACATGC GCCAGCTGCG CCAGATGCTC
ACGGGGCTGG CGCAGAGCGC GGCCGATGTG CTGATCCAGG GCGAGACCGG CACGGGCAAG
GAACTGGTGG CGCGCTGCCT GCACGAGGCC AGCGCGCGGC GCGATGGCAA CTTCGTGGCC
GTCAACTGCG GCGGCCTGCC CGATACGCTG TTCGACAGCG AAATGTTCGG CAGCGAGGCC
GGCGCCTATA CCGGCGCGGG CAAGAAGCGC ATCGGCAAGC TGGAGCACGC CAGCGGCGGC
ACGCTATTCC TGGACGAGAT CGAGAGCATG CCCCTGCCCA TGCAGATCAA GCTGCTGCGC
GTGCTGCAGG AACGCGTGCT GGAGCGCCTG GGCTCCAACA CCCTGATCCC CATCGACTGC
CGCGTGATCG CGGCCACCAA GGTGGATCTG CTCGAGCTCA GCAGGCAGGG CTTGTTCCGC
GCCGACCTGT ACTACCGCCT GAACGTGGCC ACCGTCTCGC TGCCGCCGCT GCGCGAGCGG
CGCGAGGACG TGCCGCTGCT GTTCGAGCAC TTCGCGCTGC AGGGCGCCGC GCGCCACCAG
CGGCCCGTGC CCGAGCTGAC CACGGCGCGC GTGCAGCAAC TGCTGGGCTA TGACTGGCCC
GGCAACGTGC GCGAGCTGCG CAACGTGGCC GAGCGCACGG TGCTGGGCAT CGAGACCGGC
TCGCCCCCCT TCGGCCAGCC GGCCGGCACC ACCGCGCAGG ACGCCGTGCC CCGGCCGCTG
TCCGCCGCTG TCGAGGCCTT CGAGCGCGCC CTCATCGCCG ACGCCCTGCG CCGCCACGCC
GGCAGCCTGG CGCGCACGGC CGAAGCCCTG TCCATGCCCA AGACCACGCT GCACGACAAG
ATCCGCAAGT ACGGGTTGGA TGGGTAG
 
Protein sequence
MTDALKVLII EDDPDIVLGC EQALQLEGIA CESVGSAEQA RRRLSRDFAG IVVSDIRLPR 
MDGMAFLREL VAMDAELPVV LITGHGDISM AVQAMKDGAQ DFIQKPFAPE TLVGAVRRAL
ERRRLVLEVR ALRQQLDQRD SLEHRLIGRA PNMRQLRQML TGLAQSAADV LIQGETGTGK
ELVARCLHEA SARRDGNFVA VNCGGLPDTL FDSEMFGSEA GAYTGAGKKR IGKLEHASGG
TLFLDEIESM PLPMQIKLLR VLQERVLERL GSNTLIPIDC RVIAATKVDL LELSRQGLFR
ADLYYRLNVA TVSLPPLRER REDVPLLFEH FALQGAARHQ RPVPELTTAR VQQLLGYDWP
GNVRELRNVA ERTVLGIETG SPPFGQPAGT TAQDAVPRPL SAAVEAFERA LIADALRRHA
GSLARTAEAL SMPKTTLHDK IRKYGLDG