Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4293 |
Symbol | |
ID | 5749881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4697598 |
End bp | 4698944 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641299396 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001565309 |
Protein GI | 160899727 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.475037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CCCTCAAAGT CCTGATCATC GAGGATGACC CCGACATCGT GCTCGGCTGC GAGCAGGCGC TGCAGCTCGA AGGTATCGCC TGCGAAAGCG TGGGCAGCGC CGAGCAGGCG CGCCGGCGCC TGTCGCGCGA CTTCGCGGGC ATCGTGGTCA GCGACATCCG CCTGCCGCGC ATGGACGGCA TGGCCTTTCT GCGCGAACTG GTGGCCATGG ATGCCGAGCT GCCCGTGGTG CTGATCACCG GCCACGGCGA CATCTCCATG GCCGTACAGG CCATGAAGGA CGGCGCCCAG GACTTCATCC AGAAACCCTT CGCCCCCGAA ACCCTGGTCG GCGCCGTGCG CCGCGCCCTG GAGCGCCGGC GCCTGGTGCT GGAGGTGCGG GCGCTGCGTC AGCAGCTGGA CCAGCGCGAC AGCCTGGAGC ACCGGCTGAT AGGCCGCGCG CCCAACATGC GCCAGCTGCG CCAGATGCTC ACGGGGCTGG CGCAGAGCGC GGCCGATGTG CTGATCCAGG GCGAGACCGG CACGGGCAAG GAACTGGTGG CGCGCTGCCT GCACGAGGCC AGCGCGCGGC GCGATGGCAA CTTCGTGGCC GTCAACTGCG GCGGCCTGCC CGATACGCTG TTCGACAGCG AAATGTTCGG CAGCGAGGCC GGCGCCTATA CCGGCGCGGG CAAGAAGCGC ATCGGCAAGC TGGAGCACGC CAGCGGCGGC ACGCTATTCC TGGACGAGAT CGAGAGCATG CCCCTGCCCA TGCAGATCAA GCTGCTGCGC GTGCTGCAGG AACGCGTGCT GGAGCGCCTG GGCTCCAACA CCCTGATCCC CATCGACTGC CGCGTGATCG CGGCCACCAA GGTGGATCTG CTCGAGCTCA GCAGGCAGGG CTTGTTCCGC GCCGACCTGT ACTACCGCCT GAACGTGGCC ACCGTCTCGC TGCCGCCGCT GCGCGAGCGG CGCGAGGACG TGCCGCTGCT GTTCGAGCAC TTCGCGCTGC AGGGCGCCGC GCGCCACCAG CGGCCCGTGC CCGAGCTGAC CACGGCGCGC GTGCAGCAAC TGCTGGGCTA TGACTGGCCC GGCAACGTGC GCGAGCTGCG CAACGTGGCC GAGCGCACGG TGCTGGGCAT CGAGACCGGC TCGCCCCCCT TCGGCCAGCC GGCCGGCACC ACCGCGCAGG ACGCCGTGCC CCGGCCGCTG TCCGCCGCTG TCGAGGCCTT CGAGCGCGCC CTCATCGCCG ACGCCCTGCG CCGCCACGCC GGCAGCCTGG CGCGCACGGC CGAAGCCCTG TCCATGCCCA AGACCACGCT GCACGACAAG ATCCGCAAGT ACGGGTTGGA TGGGTAG
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Protein sequence | MTDALKVLII EDDPDIVLGC EQALQLEGIA CESVGSAEQA RRRLSRDFAG IVVSDIRLPR MDGMAFLREL VAMDAELPVV LITGHGDISM AVQAMKDGAQ DFIQKPFAPE TLVGAVRRAL ERRRLVLEVR ALRQQLDQRD SLEHRLIGRA PNMRQLRQML TGLAQSAADV LIQGETGTGK ELVARCLHEA SARRDGNFVA VNCGGLPDTL FDSEMFGSEA GAYTGAGKKR IGKLEHASGG TLFLDEIESM PLPMQIKLLR VLQERVLERL GSNTLIPIDC RVIAATKVDL LELSRQGLFR ADLYYRLNVA TVSLPPLRER REDVPLLFEH FALQGAARHQ RPVPELTTAR VQQLLGYDWP GNVRELRNVA ERTVLGIETG SPPFGQPAGT TAQDAVPRPL SAAVEAFERA LIADALRRHA GSLARTAEAL SMPKTTLHDK IRKYGLDG
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