Gene Daci_4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4285 
Symbol 
ID5749873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4689877 
End bp4690500 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID641299388 
Productuncharacterized peroxidase-related enzyme 
Protein accessionYP_001565301 
Protein GI160899719 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA ACGACAACCA CCACACCCAG GAGACAAGAC ACATGGCCAC CGCCCGCTAC 
CCCCAGCCCG AACTGTCCAG CCTGCCCGAG GACATCCGCA CCCGCATCCT TGAAGTGCAG
GAAAAGGCAG GCTTCATTCC CAACGTCTTC CTGGCCTTTG CGCGCCGCCC GGCCGAATGG
CGCGCCTTTT TCGCCTACCA CGATGCCCTC ATGCTCAAGG AAGAAGGCAG CCTGACCAAG
GGCGAGCGCG AGATGATCGT CACCACCACC AGCGCGGCCA ACCAGTGCCT GTACTGCGTG
GTGGCCCACG GCGCCATCCT GCGCATCTAC GAAAAGCAGC CCTACGTGGC CGACCAGGTG
GCGGTCAACT ACCGCAAGGC CGACATCAGC GCCCGCCAGC GCGCCATGCT GGACTTCGCC
ATGAAGGTCT GCGAACGCAG CCATGAAATC TGCGAGGCCG ACTTCGAGGC GCTGTACCCG
CATGGCTTCG ACGACGAGGA CATCTGGGAC ATCGCCGCCA TCACCGCCTT CTTCGGCCTG
TCCAACCGCA TGGCCAGCTT TGCCGGCATG CAGCCCAATC CCGAGTTCTT CCTCATGGGG
CGCGTGCCGC GCGAGAAGAA GTAG
 
Protein sequence
MARNDNHHTQ ETRHMATARY PQPELSSLPE DIRTRILEVQ EKAGFIPNVF LAFARRPAEW 
RAFFAYHDAL MLKEEGSLTK GEREMIVTTT SAANQCLYCV VAHGAILRIY EKQPYVADQV
AVNYRKADIS ARQRAMLDFA MKVCERSHEI CEADFEALYP HGFDDEDIWD IAAITAFFGL
SNRMASFAGM QPNPEFFLMG RVPREKK