Gene Daci_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4277 
Symbol 
ID5749865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4681144 
End bp4681830 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID641299380 
Productdimethylmenaquinone methyltransferase 
Protein accessionYP_001565293 
Protein GI160899711 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.126556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC TCCCAGAAAT CATCCGTGAC ATAGAGCGCG TGGACGCCCA AGTCGTGCAA 
CGCGCAGCAG GCTTTCAGGC CGCCATCCTG GCCGACGTGG CGGGCCGCCG CGGCACCATG
CATGCGCGCG TGGCGCCCGT GCACCAGGGC ATGAAGGTGG CCGGCCCGGC CTTCACCGTC
GAGGTGCGCC CCGGCGACAA CCTCATGATC CACGCCGCCA TCGCGCTGGC CCGGCCCGGC
GACGTGCTGG TCATCGACGG CAAGGGCGAC CAGACGGCGG CGCTCATGGG CACGCTGATG
CTCAGCGCCT GCAAGAAGCT GGGCCTTGCC GGCGTCATCG TGGACGGCGC CATCCGCGAC
CGGCTGGAGC TGCTGGAGCT GGACTTCCCC GTGTTCAGCG CAGGCTTCAA TCCCGCAGGC
CCGACCAAGT TCGTGCCGGG CCGCATCAAC CACACCATCT CCGCTGGTGG CACGACGGTT
CACCCGGGCG ACCTGGTGGT GGGCGATGCC GATGGCGTGG TCGTCATCGA GCGCGCCAAG
GCCCCCGCCA TGCTGGAGCT GGCCGTGAAG AAGGTGGCGG ACGAAGCCGC CCGCATCGAG
GCCATTGCGC GCGGCGACAC CGCATCGAAG TGGCTGCCCG CAGCCCTGCG CGCGGCCGGC
GTGCTCAAGG AAGGGGAATC GCTGTGA
 
Protein sequence
MSQLPEIIRD IERVDAQVVQ RAAGFQAAIL ADVAGRRGTM HARVAPVHQG MKVAGPAFTV 
EVRPGDNLMI HAAIALARPG DVLVIDGKGD QTAALMGTLM LSACKKLGLA GVIVDGAIRD
RLELLELDFP VFSAGFNPAG PTKFVPGRIN HTISAGGTTV HPGDLVVGDA DGVVVIERAK
APAMLELAVK KVADEAARIE AIARGDTASK WLPAALRAAG VLKEGESL