Gene Daci_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4275 
Symbol 
ID5749863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4679140 
End bp4680144 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID641299378 
Producthypothetical protein 
Protein accessionYP_001565291 
Protein GI160899709 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0914627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGGA ATTTCCAAGA GGTCCGCCGC CTGGCCTTGC GCGGCAGCCT GCTGGCCGCC 
GTGGGGCTGG CCGCGCTGGG CGCCCAGCCC GCGCTGGCGC AGAAGGACTA TCCGGCCAAG
CCCGTGCGGC TGGTCGTGGG CTTTGCGGCG GGCGGCCCCA CCGACGTGGT GGCGCGCGCC
TTTGCCGACC ATGCGGGCAA GGCGCTGGGC CAGCCCTTCG TGGTGGACAA CAAGCCCGGG
GCCAACACCA TCGTGGCCGC GCAGGCCGTG GCTGGTGCGC CGGCCGATGG CTACACCCTG
CTGTTCGGCG CCACCAACCA CAGCATGATC CCGGCGCTGT ACCAGGGCCG CGTGAAGTTC
GACGTGGTGC GCTCGTTCCG GCCGCTGTGC ACGGTGGCCA GCAGCCCCAC GGTGCTGGTC
GTGGGGCCGG GCATGCCGGC GCGCAGCCTG CAGGAGTACA TGGACCAGGC GCGCAGCCGG
CCCGGCAGCG TCACGGCCGG CACGGCGGGC ATGGGCAGTT CGGGCCATTT CGCCACCGAG
ATGTTTGCGC GGGCCAAGGG CCTGAAGCTC AACCACGTGC CCTACAAGGG CGCGGCGCCC
GTGGTCACGG ATCTCATGGG CGGCCAGCTC GACAGCTCCT TCGCCACGCT GGGCTCGGTG
CTGCCCCAGG TGCGCAGCGG CAAGCTCACG GCGCTGGCCG TGGCCTCGCC CAAACGCGCG
TCCCTGCTGC CCCAGGTGCC GACCTTTGCA GAAGCGGGCG GCGGCGACTA CTCGGCCGAT
GTCTGGTACG GCGTGCTCGC GCCGGCCGGC ATTCCCGACG GCGTGGCCCA GGCGCTGGAG
CGCGTGGCCG TGGAGTTTGC CAAGAGTGCC TCGGCTGCGG ACAAGCTGCA CGGCCTGGGC
ATGGATGCCG AGTCGAGCTG CGGCAGCGCC TTCGCGCAGC GCGTGGCCAG CGAAGCGGCG
TCCTATGCGC AGATCGCCCG CGAACTGAAC CTGAAGGCGG ATTGA
 
Protein sequence
MSRNFQEVRR LALRGSLLAA VGLAALGAQP ALAQKDYPAK PVRLVVGFAA GGPTDVVARA 
FADHAGKALG QPFVVDNKPG ANTIVAAQAV AGAPADGYTL LFGATNHSMI PALYQGRVKF
DVVRSFRPLC TVASSPTVLV VGPGMPARSL QEYMDQARSR PGSVTAGTAG MGSSGHFATE
MFARAKGLKL NHVPYKGAAP VVTDLMGGQL DSSFATLGSV LPQVRSGKLT ALAVASPKRA
SLLPQVPTFA EAGGGDYSAD VWYGVLAPAG IPDGVAQALE RVAVEFAKSA SAADKLHGLG
MDAESSCGSA FAQRVASEAA SYAQIARELN LKAD