Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4275 |
Symbol | |
ID | 5749863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4679140 |
End bp | 4680144 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641299378 |
Product | hypothetical protein |
Protein accession | YP_001565291 |
Protein GI | 160899709 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0914627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAGGA ATTTCCAAGA GGTCCGCCGC CTGGCCTTGC GCGGCAGCCT GCTGGCCGCC GTGGGGCTGG CCGCGCTGGG CGCCCAGCCC GCGCTGGCGC AGAAGGACTA TCCGGCCAAG CCCGTGCGGC TGGTCGTGGG CTTTGCGGCG GGCGGCCCCA CCGACGTGGT GGCGCGCGCC TTTGCCGACC ATGCGGGCAA GGCGCTGGGC CAGCCCTTCG TGGTGGACAA CAAGCCCGGG GCCAACACCA TCGTGGCCGC GCAGGCCGTG GCTGGTGCGC CGGCCGATGG CTACACCCTG CTGTTCGGCG CCACCAACCA CAGCATGATC CCGGCGCTGT ACCAGGGCCG CGTGAAGTTC GACGTGGTGC GCTCGTTCCG GCCGCTGTGC ACGGTGGCCA GCAGCCCCAC GGTGCTGGTC GTGGGGCCGG GCATGCCGGC GCGCAGCCTG CAGGAGTACA TGGACCAGGC GCGCAGCCGG CCCGGCAGCG TCACGGCCGG CACGGCGGGC ATGGGCAGTT CGGGCCATTT CGCCACCGAG ATGTTTGCGC GGGCCAAGGG CCTGAAGCTC AACCACGTGC CCTACAAGGG CGCGGCGCCC GTGGTCACGG ATCTCATGGG CGGCCAGCTC GACAGCTCCT TCGCCACGCT GGGCTCGGTG CTGCCCCAGG TGCGCAGCGG CAAGCTCACG GCGCTGGCCG TGGCCTCGCC CAAACGCGCG TCCCTGCTGC CCCAGGTGCC GACCTTTGCA GAAGCGGGCG GCGGCGACTA CTCGGCCGAT GTCTGGTACG GCGTGCTCGC GCCGGCCGGC ATTCCCGACG GCGTGGCCCA GGCGCTGGAG CGCGTGGCCG TGGAGTTTGC CAAGAGTGCC TCGGCTGCGG ACAAGCTGCA CGGCCTGGGC ATGGATGCCG AGTCGAGCTG CGGCAGCGCC TTCGCGCAGC GCGTGGCCAG CGAAGCGGCG TCCTATGCGC AGATCGCCCG CGAACTGAAC CTGAAGGCGG ATTGA
|
Protein sequence | MSRNFQEVRR LALRGSLLAA VGLAALGAQP ALAQKDYPAK PVRLVVGFAA GGPTDVVARA FADHAGKALG QPFVVDNKPG ANTIVAAQAV AGAPADGYTL LFGATNHSMI PALYQGRVKF DVVRSFRPLC TVASSPTVLV VGPGMPARSL QEYMDQARSR PGSVTAGTAG MGSSGHFATE MFARAKGLKL NHVPYKGAAP VVTDLMGGQL DSSFATLGSV LPQVRSGKLT ALAVASPKRA SLLPQVPTFA EAGGGDYSAD VWYGVLAPAG IPDGVAQALE RVAVEFAKSA SAADKLHGLG MDAESSCGSA FAQRVASEAA SYAQIARELN LKAD
|
| |