Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4273 |
Symbol | |
ID | 5749861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4677250 |
End bp | 4678140 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641299376 |
Product | amidohydrolase 2 |
Protein accession | YP_001565289 |
Protein GI | 160899707 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0246696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATGA ACGCATCGAC CATCGCCGTT GCGCATTCGG CCGGCACGAA CCGGCCTTTG CGCACGCTGC CGCCGCTGGC CTGCGACAGC CACATGCACA TCTTCGATGC GCGCTTTGCG CCGTCGCCGC ACTGGCCGCG CACGCCGCCG CAGGCCGACG TGGCCATGTA CCGTCAACTG CAGCAGCGCC TGGGCACCTC GCGCGCCGTG GTGGTCACGC CCTCGACCTA TGGCACGGAC AACGCCTGCA CGCTCGATGC GCTGGATCGC CTGGGCGATG TGGCACGCGG CGTGGCCGTG GTCGCCCACG ACGTGGCCGA TGCCGAGCTG GACCGGCTGG CCGCGCACCG CGTCTGCGGG GTGCGCGTGA ACTTTGTCTC GCCGCAGTCC TGGGGCGAGA CCACGGCTCA CATGCTGGTC ACGCTGGCGC ACCGGGTTGC ACGGCTGGGC TGGCATGTGC AGGTCTTTGT GCAGCCCGAA CAGCTGGTGG CGCTGGAGCC TGTGCTGGGT GCGCTGCCTG TGCCCCTGGT CGTGGACCAC CTGGGCCGCA TCGACCCGGC TGAAGGCATG GAGGGCGCGG CCCATGCCGC GCTGCGCCGG CTGCTCGACG GCGGCAACAC CTGGGTCAAG CTCTCCGGCG CCTATATGCG TTCATCGGTG GGCGGCCCTT CCTATGCCGA CACGCTGCCG CTGGGCCGCG ATCTGGTGCG CGCCGCGCCC GAGCGCCTGG TCTGGGGCAG CGACTGGCCG CACACCACCG AGGCGCCGGG CTCCGTCAAC GATGCCGACC TGGTGGACCT GCTGCAGGCC TGGGCGGGCA CGGACGAGGC CATGGACCGC ATCCTGGTGG ACAACCCCGC AAGGCTGTAT GGCTTCGACG GCGCGGCCTG A
|
Protein sequence | MAMNASTIAV AHSAGTNRPL RTLPPLACDS HMHIFDARFA PSPHWPRTPP QADVAMYRQL QQRLGTSRAV VVTPSTYGTD NACTLDALDR LGDVARGVAV VAHDVADAEL DRLAAHRVCG VRVNFVSPQS WGETTAHMLV TLAHRVARLG WHVQVFVQPE QLVALEPVLG ALPVPLVVDH LGRIDPAEGM EGAAHAALRR LLDGGNTWVK LSGAYMRSSV GGPSYADTLP LGRDLVRAAP ERLVWGSDWP HTTEAPGSVN DADLVDLLQA WAGTDEAMDR ILVDNPARLY GFDGAA
|
| |