Gene Daci_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4273 
Symbol 
ID5749861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4677250 
End bp4678140 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID641299376 
Productamidohydrolase 2 
Protein accessionYP_001565289 
Protein GI160899707 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0246696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA ACGCATCGAC CATCGCCGTT GCGCATTCGG CCGGCACGAA CCGGCCTTTG 
CGCACGCTGC CGCCGCTGGC CTGCGACAGC CACATGCACA TCTTCGATGC GCGCTTTGCG
CCGTCGCCGC ACTGGCCGCG CACGCCGCCG CAGGCCGACG TGGCCATGTA CCGTCAACTG
CAGCAGCGCC TGGGCACCTC GCGCGCCGTG GTGGTCACGC CCTCGACCTA TGGCACGGAC
AACGCCTGCA CGCTCGATGC GCTGGATCGC CTGGGCGATG TGGCACGCGG CGTGGCCGTG
GTCGCCCACG ACGTGGCCGA TGCCGAGCTG GACCGGCTGG CCGCGCACCG CGTCTGCGGG
GTGCGCGTGA ACTTTGTCTC GCCGCAGTCC TGGGGCGAGA CCACGGCTCA CATGCTGGTC
ACGCTGGCGC ACCGGGTTGC ACGGCTGGGC TGGCATGTGC AGGTCTTTGT GCAGCCCGAA
CAGCTGGTGG CGCTGGAGCC TGTGCTGGGT GCGCTGCCTG TGCCCCTGGT CGTGGACCAC
CTGGGCCGCA TCGACCCGGC TGAAGGCATG GAGGGCGCGG CCCATGCCGC GCTGCGCCGG
CTGCTCGACG GCGGCAACAC CTGGGTCAAG CTCTCCGGCG CCTATATGCG TTCATCGGTG
GGCGGCCCTT CCTATGCCGA CACGCTGCCG CTGGGCCGCG ATCTGGTGCG CGCCGCGCCC
GAGCGCCTGG TCTGGGGCAG CGACTGGCCG CACACCACCG AGGCGCCGGG CTCCGTCAAC
GATGCCGACC TGGTGGACCT GCTGCAGGCC TGGGCGGGCA CGGACGAGGC CATGGACCGC
ATCCTGGTGG ACAACCCCGC AAGGCTGTAT GGCTTCGACG GCGCGGCCTG A
 
Protein sequence
MAMNASTIAV AHSAGTNRPL RTLPPLACDS HMHIFDARFA PSPHWPRTPP QADVAMYRQL 
QQRLGTSRAV VVTPSTYGTD NACTLDALDR LGDVARGVAV VAHDVADAEL DRLAAHRVCG
VRVNFVSPQS WGETTAHMLV TLAHRVARLG WHVQVFVQPE QLVALEPVLG ALPVPLVVDH
LGRIDPAEGM EGAAHAALRR LLDGGNTWVK LSGAYMRSSV GGPSYADTLP LGRDLVRAAP
ERLVWGSDWP HTTEAPGSVN DADLVDLLQA WAGTDEAMDR ILVDNPARLY GFDGAA