Gene Daci_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4256 
Symbol 
ID5749844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4655907 
End bp4656839 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID641299359 
Producthypothetical protein 
Protein accessionYP_001565272 
Protein GI160899690 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.011054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0603426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC GCACCAAAGC CATCATCACC TGCGCGCCCA CGGGCGCCAT CCACACGCCC 
AGCATGTCGC CCCACCTGCC CGTGACGGCC GAGCAGATTG CCCGCGCCGC CATCGATGCC
GCCGAGGCCG GCGCCGCCAT CGTGCACCTG CATGCCCGTG ATCCCCGCGA CGGGCGCCCT
TCGCAGGACC CGGATCTGTT CCGCCCCTTT CTCAAGGCGA TCCGTGCCGA GAGCGATGCC
ATCGTCAACA TCACCACGGG CGGCAGCCCG CACATGACGG TGCCAGAGCG CATGCGGCCC
GTCACCGAGT TCCAGCCCGA GCTGGCCTCG CTGAACATGG GATCGATGAA CTTCGGCCTG
TTCCCCATGC TGGAGCGCTT CCCGAACCTG GAACACGCCT GGGAGCGCGA GCATCTGGAA
AACAGCCGCA ACCTGGTCTT CAAGAACACC TTTGCCGATA TCGAAGGCAT CCTGCGGCTG
GGCCAGGCCC AGGGCACGCG CTTCGAGTTC GAGTGCTACG ACATCAGCCA CCTGCACAAC
CTGGCGCATT TCGTGGACCG CGGGCTGGTG CAGGGGCCCG TGTTCGTGCA GTCGGTGTTC
GGCATCCTGG GCGGCATCGG CGGCCACCCG GAGGACCTGA TGCACATGCG GCGCACGGCC
GACCGCCTGC TGGGCAGCAA CTACCAGTGG TCCATCCTGG GCGCCGGGCG CAACCAGCTG
CCGCTGGCCA CCATGGGCGC GGCCATGGGC TCGCATGTGC GCGTGGGGCT GGAAGACTCT
CTGTGGATAG GCCCGGGGCA GCTGGCCACC TCCAGCGCCG AGCAGGTGCG CCGCATCCGC
ACCGTGCTCG AGGCCCTGAA TGTCGACGTC GCCACGCCTG ACGAGGCGCG CAGCATGCTG
GGCCTCAAGG GTGCGGCCAA CGTCGCCTTC TGA
 
Protein sequence
MATRTKAIIT CAPTGAIHTP SMSPHLPVTA EQIARAAIDA AEAGAAIVHL HARDPRDGRP 
SQDPDLFRPF LKAIRAESDA IVNITTGGSP HMTVPERMRP VTEFQPELAS LNMGSMNFGL
FPMLERFPNL EHAWEREHLE NSRNLVFKNT FADIEGILRL GQAQGTRFEF ECYDISHLHN
LAHFVDRGLV QGPVFVQSVF GILGGIGGHP EDLMHMRRTA DRLLGSNYQW SILGAGRNQL
PLATMGAAMG SHVRVGLEDS LWIGPGQLAT SSAEQVRRIR TVLEALNVDV ATPDEARSML
GLKGAANVAF