Gene Daci_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4232 
Symbol 
ID5749820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4631233 
End bp4632120 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID641299335 
Productpolyketide biosynthesis O-methyltransferase-like protein 
Protein accessionYP_001565248 
Protein GI160899666 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0401297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.329774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC CTCTTGCACC GTCGGCCGGC CCGGCTTTCA CCGATGCGCC GCCCTCCACG 
CCCCGGCAGG AAAAACTGTC CGACGTCAGC GAGACGCTGC GCATTCCGCT GACCGCCCGC
GCACTGGGCG ACCGGCTGTT TCCGGGCATG GCCGTCAGCG ATGCCCATGC CTTGGACACG
CTGACCCAGC TGGGCGACGA CGGCAGCCGC TGGCTTCAGG ACAGGCAGAG CATCTACGGC
GTGCTGGCGC GCACGCACTG CTTTCGCGCG CTGGCGCAGG ACTTTCTCCG GCGCCAGCCG
CAGGGCCATG TCGTGAACCT GGGCTGCGGC CTCAGCGACT ATTTCCAATG GCTGGACAAC
GGGCAGATGC ACATGACGGA TGCGGACCTG GGGCCGGTCG TTGCACTGCG CAGGCGGTTG
CTGCCCTGGC AATCGGAGCG CCAGGAGATC CGTGAATTCG ACCTGGCCGA CGCCGACTGG
TGGCAGCGGC TGGGACTGCC GGCCGACAGG TCAGGGCCTG CCGTCTTCAT GATGGCCGAA
GGCGTTTCCA TGTACCTGCA AAAAGAGCAG ATACAGGCGC TGTGGACCAC GTTTGCGCAA
TGCAGCCCGC CGGGTTCGGA ACTGGTGTTC GACGCCATGT GCTGGCTGGC CGCCGGGCGC
GCAAGCCAGC ACCCCTCGGT CCGGCTCACC CAGGCCCAGT TCCATTGGGG CCTGCGCCGC
GAGGCCGATC TGGCGCAAGC CCATCCGCGC CTGCAGCTGG TGGCCGCGCA CCAGGTGATG
GAAGGCTACG GCCCGCCCTA CTCGCTGGTG GGGCCGGCAT TCCGCTGGAC CTTTGGCGTG
CACTTCTATG CCATCTACCA GTTGAAGTCG GTCGAGACGG CGGCTTAG
 
Protein sequence
MPEPLAPSAG PAFTDAPPST PRQEKLSDVS ETLRIPLTAR ALGDRLFPGM AVSDAHALDT 
LTQLGDDGSR WLQDRQSIYG VLARTHCFRA LAQDFLRRQP QGHVVNLGCG LSDYFQWLDN
GQMHMTDADL GPVVALRRRL LPWQSERQEI REFDLADADW WQRLGLPADR SGPAVFMMAE
GVSMYLQKEQ IQALWTTFAQ CSPPGSELVF DAMCWLAAGR ASQHPSVRLT QAQFHWGLRR
EADLAQAHPR LQLVAAHQVM EGYGPPYSLV GPAFRWTFGV HFYAIYQLKS VETAA