| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4224 |
|---|
| Symbol | |
|---|
| ID | 5749812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4625316 |
|---|
| End bp | 4626026 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641299327 |
|---|
| Product | threonyl/alanyl tRNA synthetase SAD |
|---|
| Protein accession | YP_001565240 |
|---|
| Protein GI | 160899658 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.119037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.17727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGA CGCACAAGCT CTTTGACGAC GACGCCTACC TGGACCGCTG CGAAGCCACC
GTGACGGCCG TCAGCGCCGA GGGCGTCGAG CTCGATGCCA CGGTCTGCTA TGCCCGCAGC
GGCGGCCAGG CCGGCGACAC CGGCACGCTG ACCCTGGCCG ATGGCCGCAG TCTGGCCCTG
ATCGACACCG TCTATGCCGA TGACCGTCAG CGCATCCTGC ATGTGCTGCA GACCGATGCC
CCGCCCCAGG TGGGCGAGCG CGTTCAGGTA GCCATCGACT GGGACAGGCG CCACCGGCTG
ATGCGCCTGC ACACCTGCCT GCACCTGCTG GGCGTGCTGG TGCCTGTGCC CGTGACGGGC
TGCAGCATCT CGCCGGACTC GGCACGCCTG GATTTCGACC TGCCCGAGTC CACGCTGGAC
AAGACCGATC TGACGGAGCG CCTGAACGCC CTGATCACCG CCAGCCATGC GGTGAACGTG
GACCGCATCA CGCCCGAGCA ACTGGCCGCC CAGCCCGACC TGGTGCGCAC CGCAGGCGCC
GCGCCCCCGG GCGGCACCTC CACGATCCGC ATCATCGACA TCCCCGGCCT GGACCGCCAG
CCCTGCGGCG GCACGCATGT GCGCAGCACG GCCGAGATAG GCACGGTGGC GGTCACCAAG
ATCGAGAAGA AAAGCCGCAC CAACCGGCGC GTGGTGGTGC AGCTCGCCTG A
|
|---|
| Protein sequence | MPQTHKLFDD DAYLDRCEAT VTAVSAEGVE LDATVCYARS GGQAGDTGTL TLADGRSLAL
IDTVYADDRQ RILHVLQTDA PPQVGERVQV AIDWDRRHRL MRLHTCLHLL GVLVPVPVTG
CSISPDSARL DFDLPESTLD KTDLTERLNA LITASHAVNV DRITPEQLAA QPDLVRTAGA
APPGGTSTIR IIDIPGLDRQ PCGGTHVRST AEIGTVAVTK IEKKSRTNRR VVVQLA
|
|---|
| |