Gene Daci_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4217 
Symbol 
ID5749805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4618589 
End bp4619812 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID641299320 
Producthypothetical protein 
Protein accessionYP_001565233 
Protein GI160899651 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.309158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.161239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TCCATACGAA CGCCACGAAC ATCGCGACCA GCACGATGGC CAGGCGCAAT 
CGCCGACATT TCCTGGGCCT GCTGGCCGCA GGCACCGGGC TGGCACTGGC AGCGCCCCAC
CTGGCGTTGG CGCGTGCTGC CACCGAGCGC CGCTTCGTGT TCATCATCCA GCGCGGCGCG
GCCGACGGGC TGGAGACCCT GATTCCCTAT GCCGACCCCG GCTACGCCCG GCTGCGCGGC
GCCATCGCCG TGGACACGGC TGCGGCCACG CGGCTGGACG GCATGTTCGC GCTGCATCCC
TCATTGGCCG AGACCGGCAG GCTCTACGCC CAGGGCCAGG CGCTGTTCGT CCACGCGGCC
GCATCGCCCT ACAGTGACCG CTCTCATTTC GACGGCCAGA ACGTGCTGGA AACCGGAGGC
AGCGCGCCCT ACCAGGTCAA GGACGGCTGG CTCAACCGCC TGGTCGCCCA GTTGCCGCAC
CGGCAAGAGG CCATTGCCTT CGCGCCCACC GTGCCCATGG CGCTGCGCGG GCCGGCGGAA
GTGGCCTCCT ACGCGCCGTC CTCCCTGCCC CAGGCCAGTG ACGACCTGCT GCTGCGCGTG
GCCAGGCTCT ACGAGGGCGA TGCGCAGCTG CATGCTCTCT GGACTTCCGC CATGGACACG
CGCGGCGTGG CCATGGACAG TGGCAACAAC CGGCCGCGCC TGGATGGCGC AAGCCTGGGC
AAGCTGGCAG CCGGCTTTCT TGCCCGCCAG GACGGGCCGC GCATCGCCAT GATCGAAACC
GGCGGCTGGG ACACGCACAG TGCACAAAAC AACCGGCTGG CGGCCCAGCT CAAGAACCTC
GATGCACTGA TTGCGGCGCT GCATGACGGC CTCGGCGATG CCTGGTCGCA GACCGTGGTG
CTGGTGGCCA CCGAGTTCGG CCGCACGGCT GCGGCCAACG GCACCGGTGG CACCGACCAC
GGAACAGGCG CCGTCGCCAT GCTGATGGGC GGCGCGGTTC AGGGCGGCCG CGTGCTGGCC
GACTGGCCTG GCCTGCAGCC CGGCCAGCTG TTGGAGAACC GGGACCTGAA ACCGACCACC
AGCGTCGATG CGCTGATTGC CTCGGCCGCC GGCGAGTGCT TCGGCATCGA CCCGCAGCGG
CTGGCGCGCA ACCTGTTCCC CGAAGGCCAT GCCCTGCCAG GCGGTGCCCC GGCGCGGTCG
CTGCCGCCAT TGCTGAGAGC ATGA
 
Protein sequence
MTTIHTNATN IATSTMARRN RRHFLGLLAA GTGLALAAPH LALARAATER RFVFIIQRGA 
ADGLETLIPY ADPGYARLRG AIAVDTAAAT RLDGMFALHP SLAETGRLYA QGQALFVHAA
ASPYSDRSHF DGQNVLETGG SAPYQVKDGW LNRLVAQLPH RQEAIAFAPT VPMALRGPAE
VASYAPSSLP QASDDLLLRV ARLYEGDAQL HALWTSAMDT RGVAMDSGNN RPRLDGASLG
KLAAGFLARQ DGPRIAMIET GGWDTHSAQN NRLAAQLKNL DALIAALHDG LGDAWSQTVV
LVATEFGRTA AANGTGGTDH GTGAVAMLMG GAVQGGRVLA DWPGLQPGQL LENRDLKPTT
SVDALIASAA GECFGIDPQR LARNLFPEGH ALPGGAPARS LPPLLRA