Gene Daci_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4216 
Symbol 
ID5749804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4617219 
End bp4618583 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content72% 
IMG OID641299319 
Producthypothetical protein 
Protein accessionYP_001565232 
Protein GI160899650 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.114033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTG CCGCCATCGC CCTGAACCGC TTCGGCCTGG GCGCCCGCCC TGACGACGCA 
CTGCCCGCCG ACCCGCAGCG CTGGCTGCTG GATCAGCTCG CGCGCTACCA GCCACAGCCC
CCTGCCTGGG CCGGTCACAC GGACACGGAC GCGCTGCTGT CCGACTACCA GTCCCGGCAG
CGCGAGCTGC GCAGCCTGCC TGAAGACCAG CGCGCCGCCG CCCGCCAGCA GTTGCGCCGT
GGCGCACGCA ACGGCTACCT GGACGCAGTG AACGCGCGCC TGGCCAGCGC CATCGACACA
CCCACGCCGT TTGTGGAACG CCTGGTGCAT TTCTGGTCGA ACCACTTCGC GGTCTCGGTG
GAAAAGCCCG TGGTGCTCGA CCTGGCCGGC GCCTACGAGG CCGAGGCCAT ACGCCCGCAC
GTGCTGGGCC GCTTCGAGGA CCTGCTGCTT GCCGCCGTGC GCCACCCGGC CATGCTGGTC
TATCTGGACC AGGCCCAGTC GGTGGGACCC GCCAGCCCCG CTGCACAGCG CGCCGCCCGG
CGCAACCCGG ACAAGACACG CGGCCTGAAC GAAAACCTGG CGCGGGAAAT CATGGAGCTG
CACACCCTGG GCGTGCGCAG CGGCTACACC CAGCAGGACG TGACCGAGTT CGCCCGCGCG
CTCACCGGCT GGAGCCTGGG CAATGACGCT GGCAGCCCGG CCGCCGGCTT CCAGTACCGC
CCGGCATTGC ACGAGCCCGG ACCGCGCCGC CTGCTGGGCC GCAGCTATGC CGCAGGCGGG
CAGGAGCAGG CGCTGGCCAT CCTGCGCGAC CTGGCAGCCT CCCCCGCTAC CGCGCTCCAT
GTCGCGACCA AGCTGGCACG GCACTTCGTC GCCGACGATC CGCCGCCCGC GCTGGTGCAG
CGCCTTGCGG CCGCCTACCA GCGCAGCGGC GGGGACCTGC CAGCCGTCTA CCGCGCGCTG
ATCGATTCGC CAGAACCCTG GGCCGCGCCA GCCACGAAGT TCAAGACGCC CTGGGAATGG
GCCGTCTCTT CCATGCGCGC ACTGGGCCGG CGCGAGTTGA AAGGTGCTCA GGCCGCCGGC
CTGCTCAACC AGCTCGGCCA GCCAGTGTGG CGCCCCGGCT CGCCGGCCGG CTACGACGAC
ATCGCCGCCA GCTGGGCTGC GCCCGATGCG CTGGTACGCC GTGTCGAGCT GGCGCAGCGG
CTCGCAGCCC AGGCCGGCAA CAGCGTCGAT GCGCGCGCGC TGGCACCCCG ATTGCTGCCC
GGCGATGCAC TGGGCGCGGG CACGGCCGAG GCCATTGCCC GATCCGAAAG CGGCAGCGGC
GCACTCGCGC TGCTGCTGGT CTCGCCCGAC TTCCTGCGCA GGTGA
 
Protein sequence
MNSAAIALNR FGLGARPDDA LPADPQRWLL DQLARYQPQP PAWAGHTDTD ALLSDYQSRQ 
RELRSLPEDQ RAAARQQLRR GARNGYLDAV NARLASAIDT PTPFVERLVH FWSNHFAVSV
EKPVVLDLAG AYEAEAIRPH VLGRFEDLLL AAVRHPAMLV YLDQAQSVGP ASPAAQRAAR
RNPDKTRGLN ENLAREIMEL HTLGVRSGYT QQDVTEFARA LTGWSLGNDA GSPAAGFQYR
PALHEPGPRR LLGRSYAAGG QEQALAILRD LAASPATALH VATKLARHFV ADDPPPALVQ
RLAAAYQRSG GDLPAVYRAL IDSPEPWAAP ATKFKTPWEW AVSSMRALGR RELKGAQAAG
LLNQLGQPVW RPGSPAGYDD IAASWAAPDA LVRRVELAQR LAAQAGNSVD ARALAPRLLP
GDALGAGTAE AIARSESGSG ALALLLVSPD FLRR