Gene Daci_4208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4208 
Symbol 
ID5749796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4611595 
End bp4612503 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID641299311 
Producthypothetical protein 
Protein accessionYP_001565224 
Protein GI160899642 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0455716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC AACAGCTTGC CAATCTCACC CAGCCACAGC GTGACCGCCT CGCGTTCGTG 
GAATTGCGTC TGCGCTTCAT TGGGGAGATG CGCCGCCAGG ACTTGGTCGC GCGTTTTGGT
ATCCAGTCCG CTGCCGCGTC CAGGGATCTG GCGCTGTACA AGGACTTGGC TCCGGGCAAT
ATCGACTACG ACGGCAAAGG CAAGTTCTAC GTCCTGGGTT CGAGCTTCCA GCCGATCTTC
GATTTCCCAC CCGAGCGGGT GTTGTCGTGG CTGACCCAGG GGTTTGGCGA CGGTGAACCG
ATGCACATCA AGGCGTGGGT GGCCAGCGAG AGCCCGTCCC GGCTCACTCA CCCTGACCTG
GCAATCTTGG CGAGCGTCAC TCGGGCCATT CATTACGAGT GCCCGCTCGG CATCGAGTAC
CACTCCATCT CCAGCGGTCG CACCGCGCGG GAGATCGTCC CGTTCGCGCT GATCGACAAC
GGCCTGCGCT GGCACGTGCG CGCCTTCGAC CGCAAATCGC AGGAGTTCCG CGATTTCGTC
CTCACCCGGA TCAAGCGCCC TGTGGTGCGC AAGGGGCAGC CCGTAGAGTC CCACGAGATG
AGCGATCAAG ACATCCAGTG GACCCGGATT GTCGAGCTGG AGCTGGTCCC TCATCCCGAC
CAGCCTCGGC CAGAAATCAC CGAAATGGAC TACGGCATGC AGGGTGGTGC GCTGCACATG
AAGCTGCGCG CCGCCACGGC GGGCTACATC CTGCGCAAAT GGAGTGTGGA CTGTTCCCCC
GACCATCGCC TGCGCGGCCC GGAGTACCGG CTTTGGTTGA AAGACCATCT GGCGATCTAC
GGCGTGCGCA ATGCGGTGCT GGCGCCGGGG TATGCGCCGC CAAGCGCAGA AACGTCGATT
GATGACTGA
 
Protein sequence
MPHQQLANLT QPQRDRLAFV ELRLRFIGEM RRQDLVARFG IQSAAASRDL ALYKDLAPGN 
IDYDGKGKFY VLGSSFQPIF DFPPERVLSW LTQGFGDGEP MHIKAWVASE SPSRLTHPDL
AILASVTRAI HYECPLGIEY HSISSGRTAR EIVPFALIDN GLRWHVRAFD RKSQEFRDFV
LTRIKRPVVR KGQPVESHEM SDQDIQWTRI VELELVPHPD QPRPEITEMD YGMQGGALHM
KLRAATAGYI LRKWSVDCSP DHRLRGPEYR LWLKDHLAIY GVRNAVLAPG YAPPSAETSI
DD