| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4184 |
|---|
| Symbol | |
|---|
| ID | 5749772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4574633 |
|---|
| End bp | 4576039 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641299287 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565200 |
|---|
| Protein GI | 160899618 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.103191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC CTGAACTGAC AAACCTCTCC ACCAAGGCGT GCCGCCTGCT GCGTCCCACG
GTATTGGCTG GGCTGCTGGC TGGCGCACTC GTTCTTGGCG GCGGCCTGGC GTGGGCGCAG
GCCGGATTTC AGACCGGCGG CTCCGTGATC GGCGACGAAG TGATGTATTC GATTGGCGGC
GGCAGCGCGG TGTCCATGGG CCGCGTGGCC GGCATGCGCT CGATCGGCGT TGGCGTGGGC
TGGAACAGCA ACCTGATCTG CGGCGACATG AGCATCCAGA CCACGCTGCG CAACCAGCTC
AACGGCGTCA CCAACGGCTT TCAGCAGATC ATGAGCAACG TGATCCAGAG CGCCACCAGC
GCGGTGGCAT CGCTGCCTGC GCTGATCATC CAGCGCGCCG ATCCCGGCCT GTACAACCTG
CTGACCAACG GCGTGCTGCA GGCGCGCCTG GATTTCGACC GATCCAAGCT GACCTGCCGT
GCCATGGCCG AGAAGATGGC CGACACGGCG GGCGGACAAC TCGGCTGGAG CCAGATGGCC
GAAGGCATGG CACTGCGCGA TGCGGTGTCG AGCACGGATG CCGTGTCGGC AATTGAACAG
GCGGAGACGC GCCGCGGCAA CGACGGCGTG CCTTGGGTGG GTGGTAGCAA TGCGGGCGGC
GCAGGCCAGT CGGCCATCCG CGTGGTCGGC GACGTCACCC GCGCAGGCTA CAACCTGGTC
AACGGCCGCA GCGTGACCGA CACATCGTCC ATCGCTGCCG CCAGTTGCGC GAGTCTGTCT
TGCCAGACCT GGACCTCGCC ACAGCAGGCG ACCGAATGGG CCACACGGGT TCTCGGCGAA
CAGGTGCAGC GCACTTGCGA TGCCTGCACC AAGACCGAAA CGGTGCCCGG CGTCGGGCTG
ACGCCGCTGA TCCAGGAGGA GTACGAGGCA AAGCTGGAAG CCTTGCAGGA ACTGGTCTCG
GGAACGCGCA ACACCACCTT CGAGAACCTG CGTGCGGCTG GCAGCACCTC GCTGCCCATC
ACACGCGGCG TCATCGAGGC GCTGCGCGAC GAGCCGGATC AAGACCTGCT GGCGCGGCGC
CTGGCCTCGG AGGTCGCGCT GGCGTCGGTG CTGGAGAAGG CATTGCTGCT CCAGCGCACC
CTGCTGACCG GCAAGAAGGA GCCCAACGTC GCGGCGAACC AGTTGGCGGT CGAGGCCGTG
AACCACGAGA GCGACACGCT CGACCAGGAA ATCCGCAACC TCAAGACCGA GCTGGAGCTG
CGCCGCGAGC TGGCGAACAA CTCCCCCATG GCCATCATCC AGCGCCACGG CACGCGCGCG
GCTGGCTCGC GTGGCATCTA CGAAGGCGAT CCCATTCCCG ACCGCCTTGA CCGGCTCCAG
AAGGGCAATC CGGGAGGCAA CCCATGA
|
|---|
| Protein sequence | MKRPELTNLS TKACRLLRPT VLAGLLAGAL VLGGGLAWAQ AGFQTGGSVI GDEVMYSIGG
GSAVSMGRVA GMRSIGVGVG WNSNLICGDM SIQTTLRNQL NGVTNGFQQI MSNVIQSATS
AVASLPALII QRADPGLYNL LTNGVLQARL DFDRSKLTCR AMAEKMADTA GGQLGWSQMA
EGMALRDAVS STDAVSAIEQ AETRRGNDGV PWVGGSNAGG AGQSAIRVVG DVTRAGYNLV
NGRSVTDTSS IAAASCASLS CQTWTSPQQA TEWATRVLGE QVQRTCDACT KTETVPGVGL
TPLIQEEYEA KLEALQELVS GTRNTTFENL RAAGSTSLPI TRGVIEALRD EPDQDLLARR
LASEVALASV LEKALLLQRT LLTGKKEPNV AANQLAVEAV NHESDTLDQE IRNLKTELEL
RRELANNSPM AIIQRHGTRA AGSRGIYEGD PIPDRLDRLQ KGNPGGNP
|
|---|
| |