Gene Daci_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4183 
Symbol 
ID5749771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4573675 
End bp4574622 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID641299286 
Producthypothetical protein 
Protein accessionYP_001565199 
Protein GI160899617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.18849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC CCTTCGAGCG GATGCGCCGC CTGCGTGCTG GCGTGGTCTC AGTGCTGCTG 
CTCAGCGCCA CGGGCAGCTA CGCCCTCAAC ACCGCAACCA TCGTTGGCTC AGTGGCATCG
CCGGACTGCC TCGAATACCG CGTCGTCGGC ATCTGCTACT GGCTCTACTG CACCTGGACG
GGCTGCACGG TGCGCACATC CATCAAGGTC CGCCACTACA TCCCCGATGC GGTCGTCTCC
AGCTACAGCA ACACCGGCGA GAACCCTTGG GTCGAAGTCC GGGCGATGAG CGCGCCCAAC
CCATCCGCGC AGGCCGGCGG GGACGGCACC ACCAACGAAG ACCACGAAAA CAATCTCGCC
AAGTTCAAGA ACGCGGACGT CATCGGCCAT CCCGGCGTCG AGGTGTTCAA CCAGTTCGTC
TCATCGTCGG GCTACTTCTG CGAGGGCGCG GGCACGGCGT TCATGCCGTA TCTGCTCAGC
ACCCTGGACA CACTGGCCTG GCGCTACAAC GTGCCGGAGA TGGCCTACCC GGAGGCACTA
ATTCCGGGCA GGCGCGAGGT CGGCGCGCGC ACCACGATGA ACCTGTGGGG CAACGTCTAT
CCGCGCGGCG GCTTCCTGCA CCAGGCCGAC GACCACAAGG CCGGCGCCGT GGTGGCCCAG
CGCGCCGGCG ATGTCGTCAC GCGCCGTGGG CAGATTCACG TCTATCAGCC GCTGCTCGCC
AACTCGCGGC CCGGTTACTG GCCTGCCGGC GCGCTGATGG AAGGCGATGC CTCGACGGGC
AAGTGGCAGG AACTCACGCC CGTCCTGTCC TCGTCCTGCA CGGTGTTCCC GCGCAGCGGC
TTCCTGACCC AGGCGCAGCA GGGCGATTAC GCCTGGGCGC TGTGGCGGCC CTATGCGTGC
TGCGAACGTC GCGGCCAGGT ATTCCTCGGC AGCGTCGATT TCCAATGA
 
Protein sequence
MTRPFERMRR LRAGVVSVLL LSATGSYALN TATIVGSVAS PDCLEYRVVG ICYWLYCTWT 
GCTVRTSIKV RHYIPDAVVS SYSNTGENPW VEVRAMSAPN PSAQAGGDGT TNEDHENNLA
KFKNADVIGH PGVEVFNQFV SSSGYFCEGA GTAFMPYLLS TLDTLAWRYN VPEMAYPEAL
IPGRREVGAR TTMNLWGNVY PRGGFLHQAD DHKAGAVVAQ RAGDVVTRRG QIHVYQPLLA
NSRPGYWPAG ALMEGDASTG KWQELTPVLS SSCTVFPRSG FLTQAQQGDY AWALWRPYAC
CERRGQVFLG SVDFQ