Gene Daci_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4178 
Symbol 
ID5749766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4568256 
End bp4568705 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content67% 
IMG OID641299281 
Productputative signal peptide 
Protein accessionYP_001565194 
Protein GI160899612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0535453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGA ACTTGAATAG CTGGGCTCAG GGCCTGGCGC TGGCCTTGGC CGTCGCGCTG 
CTCGGTGGCT GCGCCACCAG CAAGGAAAAG CTGCTGACCC ACGGAGACAG CACGATGATG
AACATCTGGC AGCAGAACGC CGGCGACGGC GGCGGTGGTG CCGGCCAGGT AGCGCGCAGG
CAGTTGCTCG ATGCGCGCCA GAGCCTGCGC AGGCCGCTGA CCGAGATGGA CGTGCAGGCC
GCGCCTGCCG AGCAGATGCG CTACACGCGC ACGGCGCGCA ACGAGGTCTA CCGCCAGTTC
CAGCGCCTGC CCAACCCCGA TCTCGTGATG TACGTGTATC CGCATTTGGC GGGCACCGAC
CCAGTGCCGA TTCCGGGCTA TACGACCGTG TTCCCGCTGT ACCAGCGCGT GCAGTACGCC
ATGCCAGGCG AGCGCGTGGA GGATTACTGA
 
Protein sequence
MPSNLNSWAQ GLALALAVAL LGGCATSKEK LLTHGDSTMM NIWQQNAGDG GGGAGQVARR 
QLLDARQSLR RPLTEMDVQA APAEQMRYTR TARNEVYRQF QRLPNPDLVM YVYPHLAGTD
PVPIPGYTTV FPLYQRVQYA MPGERVEDY