Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4166 |
Symbol | |
ID | 5749754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4558925 |
End bp | 4559662 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641299269 |
Product | putative secreted protein |
Protein accession | YP_001565182 |
Protein GI | 160899600 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.571392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGT CGATCATCCT TTCCGCGCTC CTGCTCGCGT CTGCCCAGTT GCCCGCCTGG GCGCAGCAGC CGGCCACGGC TCCCGCCGGC AGTGCGCACA GCCAGGAGCG CCCGCTGGTT ACTCGCTCCC TGGACGACCG AGTGGCAGGC GACTGGGGCC TGCAACCGCA GGAGTGGGCT CGCTATCGCG AGCTGATGGA CGGGCCGTTG GGCATCTACT CGCCCAACCT GGACCCACTG TCCGCCCTGG GCATCGAGGC GCGCACCGAC GAGGAACGGC GCCGCTACGC AGAGCTGCAG GTGCAGGTCG AGGCGCGCCG TATCGAGAAG CTGCTCGCCT ACCAGCGTGC CTACGACCAG GCCTGGCAGC GCCTGAGTCC CGGCATGCAG CGGGTGAACC TGCCTGACGA AAAACCCGGC GCCGGCACAA GCGCCAATCC CTTGCGCGGT TCAGGCCGCA CGGCCGTGTT CGTCAAGGAC GGCTGCGCGG CCTGCGGGCA ACTCGTGCAG CGCCTGCAAT CCTCCGGCAC CGAGTTCGAC CTGTACATGG TCGGCAGCCG CCAAGACGAC ACGCGCATCC GCGACTGGGC CAAGCGTGCG AACGTCGATC CGGCGCGCGT GCGCAGCGGT GGCATCACGC TCAACCATGA TGGCGGGCGG TGGCTGTCGC TGAGCTTGCC CGGAGACCTT CCTGCGGTCG TGCGCGAGGT GAACGGTCAA TGGCAGCGCC AGCCATAG
|
Protein sequence | MKPSIILSAL LLASAQLPAW AQQPATAPAG SAHSQERPLV TRSLDDRVAG DWGLQPQEWA RYRELMDGPL GIYSPNLDPL SALGIEARTD EERRRYAELQ VQVEARRIEK LLAYQRAYDQ AWQRLSPGMQ RVNLPDEKPG AGTSANPLRG SGRTAVFVKD GCAACGQLVQ RLQSSGTEFD LYMVGSRQDD TRIRDWAKRA NVDPARVRSG GITLNHDGGR WLSLSLPGDL PAVVREVNGQ WQRQP
|
| |