| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4162 |
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| Symbol | |
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| ID | 5749750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4554031 |
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| End bp | 4555833 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641299265 |
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| Product | ATP-dependent endonuclease family protein |
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| Protein accession | YP_001565178 |
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| Protein GI | 160899596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.169092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTG CAAAAGTCAA GGTCGAAAAG TTTCGTGGGA TTGAATCCGG CATCGTGACG
CTGTCAGGCC ACAGCGTATT TCTCGGTGAC AACAACGTCG GGAAGTCAAC GCTGCTGGAG
GCCATAGATC TCGTCCTCGG CCCGGAACGG CTCTCCCGAA GACCCGTCAT CGACGAGCAC
GACTTCCACG CCGGGCGCTA CCTGGATGAA GAGGGAGATC CGGTTCTCAT TCGGATTGAA
GTTATCGTCA GTGACCTGTC CGCCGAGCAG CAGCGACACT TTCGTGACCA CATCGAGTGG
TGGTCCGCCA CGGAAAAGAC GCTACTCGTA GGCCCGCCCC CGGAAGGCAC GGATGCGTCA
GACGTGTCGG CCGCGCTGCG GGTGTTTTTC GAGGGTCGCT ACGACAAGGA AGAAGACGAC
TTCACGGGCA ATACTTTCTT CGCGACCCCA GTGCTAGCTG AAGGTACTCA CCCAACTTTC
AAAACGACCG ACAAGCGCAA GTGCGGCTTC CTGTACCTCC GGACGCTGAG GACAGGGGCG
CGGGCATTGA GCCTGGAGCG CGGGTCGTTG CTTGATGTCA TCCTCAGGCT TCAAGACAAG
CGCGTGACGA TGTGGGAAGA CCTGCTGAAC GAGTTGCGCA AACTCCCCGT GGCCGATAAG
CCGGAACTCG GCATCGCCCC GCTCTTGAAG GACGTCCAGG ACGCTGTTCG CCGATTCGTT
CCTTCTGACT GGGCAGAGGA ACCTCACATG CGCGTGTCGG ATCTCACTAG AGAGGCCCTG
CGCAAGGATT TGACCGTTTT CATGGGCACC GGCGCGAAGC GTCCGGACGG CAGCACCTAT
TGCGCGCCAT ATCACCATCA GGGCACCGGC ACGATCAATA CACTGGTGCT GGCGCTGCTA
TCCATCATCG CGGGCCTGAA GCAGAACGTC ATCTTCGCGA TGGAGGAGCC CGAGATCGCC
CTTCCGCCAC ATACCCAGAA GCGCATCGTT AACAGCGTGC GCGAGACGTC GGCACAGGCG
CTTTTCACGT CGCACTCGCC CTATGTGCTC GAAGAATTCG CGCCGTCCGA GATGCATGTG
CTGCGGCGTG ACGGGGGCAA GCTTTCTGCG ATGCTGGCGA CATACCCACC AGCGGTCAAG
CCCAAGGCAT ACAAGGCAGA GTTCAGGGCC CGCTTCTGTG AAGCGCTGCT TGCCCGATAT
GTACTTGTTG TCGAAGGTCG AACGGAGTTC GATGCGATAC CTGCAGCGGC GCGCCGGCTT
AACGACTTGA ACCCCACAGA ATACAAGACG CTTGAGGCCC TGGGGGTGGC CGTCATCGAT
GCGCAAACCG ATGCGCAGGT TGCGCCTCTC GGCAAGTTCT TTAGAGACTT GGGCAAGACG
GTCTTTGCTG TGTTCGACAA GCAGGAACCA GCCGCTTCCG CTGCCATCAA GGCCGCCGTG
CACCACTCAT TTGAATCTGC CGAGAAAGGT TTCGAGAACG TAGTGCTGCA CCACACCGCG
GAGGCAGCCC TTCGTCGATA TGCGCTCAGC CTCGTCGCGG AGAACGCGTG GCCGAACCAT
CTGATCGCCA AAACTCCTAA CGCCGCCCAG ACCGTGGAGC AAATTCGCGA CGCATTGCGG
CAATTCTTTG GCTGGGCCAA GGGAAGCGGC GATGCCGGCG ACTTGCTCGG GTGCTGCACC
GAGGCGGAGA TGCCGCAGTA TGTCCGGGAC ACGCTGCGGG TGATCCACAT CACCGTCGAA
CCTCCGCCGC TGCCACCCGT GCCGTCAGCG GCGGCAGCAC CGTTCGATGA CGAAGAGTTA
TGA
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| Protein sequence | MQIAKVKVEK FRGIESGIVT LSGHSVFLGD NNVGKSTLLE AIDLVLGPER LSRRPVIDEH
DFHAGRYLDE EGDPVLIRIE VIVSDLSAEQ QRHFRDHIEW WSATEKTLLV GPPPEGTDAS
DVSAALRVFF EGRYDKEEDD FTGNTFFATP VLAEGTHPTF KTTDKRKCGF LYLRTLRTGA
RALSLERGSL LDVILRLQDK RVTMWEDLLN ELRKLPVADK PELGIAPLLK DVQDAVRRFV
PSDWAEEPHM RVSDLTREAL RKDLTVFMGT GAKRPDGSTY CAPYHHQGTG TINTLVLALL
SIIAGLKQNV IFAMEEPEIA LPPHTQKRIV NSVRETSAQA LFTSHSPYVL EEFAPSEMHV
LRRDGGKLSA MLATYPPAVK PKAYKAEFRA RFCEALLARY VLVVEGRTEF DAIPAAARRL
NDLNPTEYKT LEALGVAVID AQTDAQVAPL GKFFRDLGKT VFAVFDKQEP AASAAIKAAV
HHSFESAEKG FENVVLHHTA EAALRRYALS LVAENAWPNH LIAKTPNAAQ TVEQIRDALR
QFFGWAKGSG DAGDLLGCCT EAEMPQYVRD TLRVIHITVE PPPLPPVPSA AAAPFDDEEL
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