| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4161 |
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| Symbol | |
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| ID | 5749749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4552056 |
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| End bp | 4553858 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299264 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001565177 |
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| Protein GI | 160899595 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.17704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCC CGTTCATCCG AGGACACCAC CATGTGCAGC CCACGGGCCA GGAGTTTTTC
ATCCTGGGGC GCGTCAGGAT GCGGATGGGG TTCCACTGGA AACCTGTCTT CACCCAGCGG
CGCACCCGCC ACGGCGACGT GGCAGCCTGC CCGGACTGCG GCACACTCAT CACCGACCTC
GACGGCGAGC CGGTCAACCC GGTCGCGCTC GAAGCCGAGG AGTCCCGCAG GAAGTGCAGC
CACTGCGCCG CGCCCCTGTG GACGCTGATC CGCCCGCGTA GCCTGTCCGG CAGCGACCAG
TCCTCGGTCG TCCTCAAAGC CTTGAAGCGC ATCCCGACCA TCGGGGAAGT CACTGCACAG
AAGCTGATGC AGAAGTTCGG TGACGGCTTC CTGGCCTCGA TGCTGGGCGA CAACATCCAT
GAGTTCATCA ACCTCATGGA TGGCAACGGC GAGCTGGTGT TTTCCGACCG TCAGGCCACG
CGCATGGAAC GTGCGATGGC CAACATGGAG TTTGGCTTTG GCGAAGGCGG CTACCAACCG
TCCGAGTTCA TCAAACGCTA CCTACCGCAA GGCACGTTCG ACCTGCTCAT CGCCGACGAG
GCGCACGAGT ACAAGAACGG TGGCAGTGCC CAGGGCCAGG CCATGGGCGT GCTGGCGGCG
AAGGCTCGCA AGACCTTGCT GCTGACCGGC ACGCTGATGG GCGGCTACGG CGATGATCTG
TTCTACCTGC TGTTCCGGGC ACTGCCCGGA CGGATGATCG AAGACGGCTA CCGCCCGACC
ACGAGCGGCA GCATGACCTC GGCTGCGATG GCATTCATGC GCGATCACGG CGTCCTCAAG
GACATCTACT CCGAGAGCGC CGGCACGGCG CACAAGACAG CCAAAGGCAC CAAGGTATCG
GTGCGCACGG TCAAGGCTCC CGGCTTCGGC CCGAAAGGCG TCTTGCGCTG CATCCTGCCG
TTTACGATTT TCCTCAAGCT CAAGGACATC GGTGGCAACG TCCTGCCGCC GTATGACGAG
GAGTTTCGTG AAGTCCAGAT GGACGTGGCG CAAGCTGCGG CCTACCGCGA TCTGGCGGGT
CGGCTGACCG CAGAACTGAA ACAGGCTCTG GCGCGACGCG ATACGACCTT GCTGGGGGTG
GTGCTCAACG TGCTATTGGC CTGGCCGGAT TGCTGCTTCC GGTCGGAGAC CGTGGTGCAT
CCGCGCACGC GCAACACCTT GGCGTTTGTC CCGGCTCAGT TCAATGAGTT CGAGATCAGC
CCCAAGGAGC GCGAGCTGAT CGACATCTGC AAAGCGGAGA AGGAACAGGG GCGCAAGGTT
CTGGCCTACA CGGTCTATAC CGGAACGCGC GACACCACGT CACGCCTGAA GGGGCTGCTG
GAGCAGGAAG GATTCAAGGT GGCGGTACTG CGCGCAAGCG TGGATGCCAG CCGCCGCGAG
GACTGGATCG CCGAGCAACT GGACCGGGGC ATCGACGTGC TCGTCACCAA TCCCGAGCTG
GTCAAGACGG GGCTGGACCT GCTGGAGTTC CCGACGATTG TGTTCATGCA AAGTGGCTAC
AACGTGTACT CGCTCCAACA GGCAGCACGC CGCTCCTGGC GCATTGGGCA GAAACAGCCC
GTGCGCGTGA TCTACCTCGG CTACGCCGGT TCCTCGCAGA TGACCTGCCT GGAACTGATG
GCCAAGAAGA TCATGGTCTC GCAGTCCACC TCGGGCGATG TGCCCGAATC GGGGCTGGAT
GTTCTGAACC AGGACGGTGA TTCCGTCGAG GTCGCACTGG CTCGGCAGTT GGTCGCTACC
TAA
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| Protein sequence | MLFPFIRGHH HVQPTGQEFF ILGRVRMRMG FHWKPVFTQR RTRHGDVAAC PDCGTLITDL
DGEPVNPVAL EAEESRRKCS HCAAPLWTLI RPRSLSGSDQ SSVVLKALKR IPTIGEVTAQ
KLMQKFGDGF LASMLGDNIH EFINLMDGNG ELVFSDRQAT RMERAMANME FGFGEGGYQP
SEFIKRYLPQ GTFDLLIADE AHEYKNGGSA QGQAMGVLAA KARKTLLLTG TLMGGYGDDL
FYLLFRALPG RMIEDGYRPT TSGSMTSAAM AFMRDHGVLK DIYSESAGTA HKTAKGTKVS
VRTVKAPGFG PKGVLRCILP FTIFLKLKDI GGNVLPPYDE EFREVQMDVA QAAAYRDLAG
RLTAELKQAL ARRDTTLLGV VLNVLLAWPD CCFRSETVVH PRTRNTLAFV PAQFNEFEIS
PKERELIDIC KAEKEQGRKV LAYTVYTGTR DTTSRLKGLL EQEGFKVAVL RASVDASRRE
DWIAEQLDRG IDVLVTNPEL VKTGLDLLEF PTIVFMQSGY NVYSLQQAAR RSWRIGQKQP
VRVIYLGYAG SSQMTCLELM AKKIMVSQST SGDVPESGLD VLNQDGDSVE VALARQLVAT
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