Gene Daci_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4157 
Symbol 
ID5749745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4548814 
End bp4549728 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID641299260 
Producthypothetical protein 
Protein accessionYP_001565173 
Protein GI160899591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0420915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CGTCCAACGA GAAATCGTAT TTCGACCTCC ACACCTCGGG CATCGGTTAC 
ATCCAGCGTG CCCGTGAAGT GCCTGTTCGG GGCGGCCGCC GTGCGCAGCC TTTCCTGGCA
TGCACCATCG CCGCGCTGGT CGGTTCCGCA AAGGATCCCA GCTATCGCTA TTTCGACGTC
AAGGTCTCGG GTGCCGAGGC CAAGAAGCTG GTCGAGCGCT ACATCGGCGT TGACGATCCC
AAGCAGCGCC CACTGGTGCG CTTTCGCCTC GGCGACCTGT GGGGCGATGC GTATATCCGC
GACAAGGGTG AGCAGAAAGG CCAAGCCGCC GCGTCCCTCA AGGCGCGACT GCTCAAGGCC
GAGCCGCTTG ACCGGGCCGA ACTGGCTTCG ATCAGGCAGC ACGAGCTGGT CACCCGCGGC
ATCGGCTACC TCAGCCGTCC GAAGGACGTC ACACCCAAAG ATGGCGACCC GTTCCTCTCT
TGCACCGTCG CCGCTCTGGC CGGGCCTGTC GATGAACCGG AGTATCGGTA CTTCGACAGC
ATCGTCACCA CCCCTGAAGC CGAGCATCTG GTTCGCCGGT GCGTGCAGGC CATCGAAGGG
GACTGCAAGG TGCTGATCGC TTTCCGTCTC AACGACATGA AGATCGATCC GTACATCCGC
ACCAAGGGTG AGCGCGCTGG GGAACCGGCC GCAAGCCTGG ATTCGACACT GATCCACATC
GGCCTGATCA AGATCGACGG CACCAAGGTC TATCCGACGA GCCCCGCGCA AGCAGATTCG
CCGCCGGCCC AGGACGCTCC CGCGCCCGAA GCCGAGGACG CCGCCCCCGC TGCAGATCAG
CCTGCCGAGC CCGCCGAGTG CGAGCCCGAA GGTGAAGTCG AGGAGCAGGA GCCGGCATTG
GCTGCTTCGT TCTGA
 
Protein sequence
MSTTSNEKSY FDLHTSGIGY IQRAREVPVR GGRRAQPFLA CTIAALVGSA KDPSYRYFDV 
KVSGAEAKKL VERYIGVDDP KQRPLVRFRL GDLWGDAYIR DKGEQKGQAA ASLKARLLKA
EPLDRAELAS IRQHELVTRG IGYLSRPKDV TPKDGDPFLS CTVAALAGPV DEPEYRYFDS
IVTTPEAEHL VRRCVQAIEG DCKVLIAFRL NDMKIDPYIR TKGERAGEPA ASLDSTLIHI
GLIKIDGTKV YPTSPAQADS PPAQDAPAPE AEDAAPAADQ PAEPAECEPE GEVEEQEPAL
AASF