Gene Daci_4147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4147 
Symbol 
ID5749735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4540174 
End bp4540974 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID641299250 
Producthypothetical protein 
Protein accessionYP_001565163 
Protein GI160899581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.119545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00139206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCA ATGAACCTCT GCAACTGAAT CTCGGCTCCC TGCGCAGCGC GATGTCGCTG 
ACGCTTCACA CGCACCACGC CTCGCGCATC TGGCATGGCC GTGCCGCCGC CGAGGGGCGA
CCGGGCATCG TCGGCCTGAA CGGCTACATC GCCCAAATGA ACAAGATGCG GCGCGGTTCG
GAGCAGGACG ACCCGTACTC GGATTGGTGG ATGCTGCGCA TCGAGGCCAA GCTCGACCAG
ACCAAGACCA CGCTGCAATC GCTGCGCGAG CAGGTGGATC AGGCACTGGC GAGCGTGCCG
CCGGCACTCA GCCTGGGCGA GAACCTTAAC GTGCAGCCCG TCAAGTTGCC GCTGTTCGTC
AATGCGCAGC TCGGCTTTGC CGCCGTCTAT CTGCTGGCCG ACTACGACGA CATCGCCCGC
AAACTGATCC TCGCCCACCA CACGGCGCTC ATCGACCGCA GCACCTTGGA GCGCTGGCTT
AACGAGGGCG CCCATGCACT GCGCAGCCTG TTTTCGCTGG CCCAGCAATA CCGCTATTCG
GGCTGCACGC GCGACGATTT CGTGTCAAAG AACGCCGCAG CACGGGCGGC GTTGGAGAAA
TTCGGCGAAC TGCCCCAGGA CGTGCTGGAA GGCACGCGCC GCTCGAAGTT CGCGCCGCCC
ATCGTGCGCC GTGGCCTGCA ACAGCGTGCT CAGAGTCCTG CTGCAGCGCC TGCCCCCAAC
GACGCGGCCA CCACCGACGA GCCCGCCACT GACGCAGCAC CCGAAGTCAG CGCCGGCGAG
GTCGAGGACG AGCAGGCATG A
 
Protein sequence
MATNEPLQLN LGSLRSAMSL TLHTHHASRI WHGRAAAEGR PGIVGLNGYI AQMNKMRRGS 
EQDDPYSDWW MLRIEAKLDQ TKTTLQSLRE QVDQALASVP PALSLGENLN VQPVKLPLFV
NAQLGFAAVY LLADYDDIAR KLILAHHTAL IDRSTLERWL NEGAHALRSL FSLAQQYRYS
GCTRDDFVSK NAAARAALEK FGELPQDVLE GTRRSKFAPP IVRRGLQQRA QSPAAAPAPN
DAATTDEPAT DAAPEVSAGE VEDEQA