| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4139 |
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| Symbol | |
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| ID | 5749727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4531718 |
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| End bp | 4533646 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641299242 |
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| Product | integrase family protein |
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| Protein accession | YP_001565155 |
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| Protein GI | 160899573 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.217214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000125149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTCAG ACCTCCAGGT TCGACAGGCC AAGGTGACCG GCAAGGCGTA TTCGCTTGTC
GATTTCGACG GTCTCTACTT CTACATCTCC GCCACCGGCT TCAAGGCCTG GCACTTCCGC
TTCACTTGGG GCGGCAAGCG CGAGCGCATG TCCTTCGGTG GCTATCCCGC GCTTTCCCTG
AAAGACGCTC GCAATCTGCG CGACGAGGCC CGGGCCATGC TGGCCAAGGG CATCAACCCG
CATTCGGAGC GCAAGCGCAA GCGCCACGCC ATCGTCCTGG CGGGCGAGCA CACCTTCCAG
GCCATCTACG ACAAATGGCT GGCCCACCGC AGCCTCTCTC TGGAAAATGA GGGCCGCCAA
AGTACGCCCA AGCAGATCGG GCGCGTCTTC GCCAAGGACG TGTTTCCCGT ATTGCGCCAC
CTGACCATCT ACGACGTCAC CCGCGCCCAC CTGCTGGACA TCATCGGCAG AGTGGAAAAG
CGTGGCTCGC TGTCGGTGGC CGAGAAGCTG CGCACCTGGT TCAGCCAGCT ATTCACCTAC
GCCTCGGTGG TGGTGCCCAA CATGGGCGAC AACCCGGCCA AGGATTTGGA CGTGGTGGCG
ATGCCGCTGC CCCCGGTGGA GAACAATCCC TTTTTGCGCA TGCCCGAGCT GCCGGCAATG
CTGCAGACGT TGCGCAAGTA CAGCGGTCGC CTGAATACGC AACTGGGTCT ACGTCTGCTG
CTGCTCACGG GCGTGCGCAC CGGTGAATTG CGCTACGCCA CGCCCGATCA GTTTGATCTG
GAGCGCGGTC TGTGGATCAT CCCGGTTGTC AGGCTCAAGC AACGCAAGCA GCTCACCAAG
AAGAAGCGCC AGCGTTTCGC CGACATCCCG CCATACATCG TGCCACTGTC GTTGCAGGCA
CAAGAGGTCG TTCGTCATTT GCTGGGAAAT CTGAAGCCAG CACAGGTGTA TCTCATCCCC
GGTGATTGGT GCCTGAAAAA CCCTCTGAGC GAGAACACGC TCAATGGCGC GCTCAAGCGT
ATGGGCTATG AAGACCAACT CACTGGGCAT GGCGTTCGCG CCACCATCTC GACTGCGCTC
AATGAATTGG GGTATCCGCC CAAGTGGGTA GACGCCCAAC TTTCGCATGC CGATCCGGAT
CGGATCAGCG CGACCTACAA CCACGCCGAG TACGTCGAGC AACGCCGCGT CATGATGCAG
GACTGGGCCG ACCGGCTGGA CTTGTTCGAG CAGAATCAGG TCGAAGTTGC CAGCACGCAC
TTGACCATCA CGTTGCAGGG CCTGCCCACA ATCGCCGGAC AGGCGGCAGC GCAGCCGCCC
GCCCTGAATC CAAACGCCCC TCAGTTGATC GTTGCGCCTG CACCCGATGC ACCAGCGGTT
CCAGCTTCCG TCTATCGACT TTCGGCGGTG CATCTGCCCG AGTACGCGCG ACCCACGCTG
TCAGAGGTGC AGCGCGAGCG CTTGCAATTG CTGGAGATAT TCGAGGCATC CCACAACCTG
TCGGTGGCCG ATTACGCCAA GCTGGTTGGC AAGTCCCGCC GCTGGATCAC TTACGAGATT
CAGGCCGGCA ATCTCCTGTC GATCCATCTG GGTCACCGTG GGCAGCGCGT CCCGGACTGG
CAACTCGACC CCATCAAGCG CAAGCTGATT CAGGCTGTCC TGAAGCTGGT GCCGCGCGGT
ATCGACACCT GGCACATCTA TCACGCACTG CTGCGGCCAT ACGATGCCCT GGGCAAGTGT
CCAGTCATCG AGGCCGTCGA TCCGACCAAC CTGCATCTTG CAGCTCGACT GGTCGCCGCA
CATACCATAG AAACCGATGA GCTTGCAGAG CAATCGGAGG CGTCTCCGGT GCTGGCCAGG
CAGACTGTAG AGCGCCTGGT AAAAACGGCA ATGTTGGTTG ATATGCCCGA AGATCCCGTC
GCCCGTTGA
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| Protein sequence | MLSDLQVRQA KVTGKAYSLV DFDGLYFYIS ATGFKAWHFR FTWGGKRERM SFGGYPALSL
KDARNLRDEA RAMLAKGINP HSERKRKRHA IVLAGEHTFQ AIYDKWLAHR SLSLENEGRQ
STPKQIGRVF AKDVFPVLRH LTIYDVTRAH LLDIIGRVEK RGSLSVAEKL RTWFSQLFTY
ASVVVPNMGD NPAKDLDVVA MPLPPVENNP FLRMPELPAM LQTLRKYSGR LNTQLGLRLL
LLTGVRTGEL RYATPDQFDL ERGLWIIPVV RLKQRKQLTK KKRQRFADIP PYIVPLSLQA
QEVVRHLLGN LKPAQVYLIP GDWCLKNPLS ENTLNGALKR MGYEDQLTGH GVRATISTAL
NELGYPPKWV DAQLSHADPD RISATYNHAE YVEQRRVMMQ DWADRLDLFE QNQVEVASTH
LTITLQGLPT IAGQAAAQPP ALNPNAPQLI VAPAPDAPAV PASVYRLSAV HLPEYARPTL
SEVQRERLQL LEIFEASHNL SVADYAKLVG KSRRWITYEI QAGNLLSIHL GHRGQRVPDW
QLDPIKRKLI QAVLKLVPRG IDTWHIYHAL LRPYDALGKC PVIEAVDPTN LHLAARLVAA
HTIETDELAE QSEASPVLAR QTVERLVKTA MLVDMPEDPV AR
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