| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4083 |
|---|
| Symbol | |
|---|
| ID | 5749670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4491322 |
|---|
| End bp | 4491909 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641299185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565099 |
|---|
| Protein GI | 160899517 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5448] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02217] conserved hypothetical protein TIGR02217 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.216019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0137038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA TCGACGTGCA GATCAACGCC AAGACGAACA TCGGGTTCGC GGGCGGGCCG
GAGTGGCGGA CGCTGGTTGT GCAGATGGCC AGCGGCCGCA ACCGCCGGCG CCAGGAGTGG
TCCATGCCGC ACCACAAGTA CACGGCGGAC TACACCACGC TGCGCCCGCA GGACCAGAAC
GACATCCTTG CCGCGTTCAT CGCGGCCAAG GGGCAGATGC ACACGTTCGC CATGCGGGAC
TGGAACGACT ACCGCGCGCG CGGCGAGGTC ATCGGCCAGG GCGACGGCAC AACCACGCCG
GTGCAACTGG TCAAGACCTA CGCATTCGGT CCGGCCAGCT ACGTGCGGCC CATCACGCTG
CCCGTGGAGC GCTCCGTGCG CGTCTATCAG GGCGGCGTGC TGGTGGCCAG CACTGTGGAC
CGGCTGACCG GCCTGGTGAC GCCAGACGCT CCGTGGGAGG ACGGCGTGGA AATCACTGCG
GACTTTGATT TCAACGTCCG CGTGCGCTTC GCCTCCGACT ATTTCCCCTT CACGCGCGAC
TCGAATGTCT CGGCTCAGAC CACGGTTGAG CTGGTAGAGG AATTCTGA
|
|---|
| Protein sequence | MSFIDVQINA KTNIGFAGGP EWRTLVVQMA SGRNRRRQEW SMPHHKYTAD YTTLRPQDQN
DILAAFIAAK GQMHTFAMRD WNDYRARGEV IGQGDGTTTP VQLVKTYAFG PASYVRPITL
PVERSVRVYQ GGVLVASTVD RLTGLVTPDA PWEDGVEITA DFDFNVRVRF ASDYFPFTRD
SNVSAQTTVE LVEEF
|
|---|
| |