Gene Daci_4077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4077 
Symbol 
ID5749664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4483653 
End bp4484129 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID641299179 
Producthypothetical protein 
Protein accessionYP_001565093 
Protein GI160899511 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.302325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.129343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTG ACCAGGCATT CGACCGCCTG CTGGGCCATG AGGGCGGCTA CAGCAACAAC 
TCAGCGGACC CGGGCGGCGA GACCATGTGG GGCGTCACGG CCCGTGTTGC CCGCGCCGAC
GGCTACTTGG GCGAGATGCG GGACCTGCCG CGCGACCGCG CAAAGAGCAT CTATCGGCGC
CTGTACTGGA CGCCCGTGCG AGCCGACGAG CTGCCCGAGG TGGTGCGCTT CGACGTGTTC
GATGGCGCCG TCAACAGCGG GCCCGCGCAG TCCATCAAGT GGCTGCAGCG CGCGGCGGGC
GCTGTGGATG ACGGCATCCT CGGCCCCAGG ACCATGGCCG CAGCTGTCGC CGCTGGCCCG
GTGCTGGCGG CGCGCTACAA CGGCCACCGG CTGCTCTTCC TGGCCGACCG CCCGACATGG
GGCAGCTTCG GCAAGGGCTG GGCCCGGCGC GTCGGCAAAA ACCTTCTGGG TGCCTGA
 
Protein sequence
MNFDQAFDRL LGHEGGYSNN SADPGGETMW GVTARVARAD GYLGEMRDLP RDRAKSIYRR 
LYWTPVRADE LPEVVRFDVF DGAVNSGPAQ SIKWLQRAAG AVDDGILGPR TMAAAVAAGP
VLAARYNGHR LLFLADRPTW GSFGKGWARR VGKNLLGA