Gene Daci_4061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4061 
Symbol 
ID5749648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4470530 
End bp4471243 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID641299163 
ProductSurfeit locus 1 family protein 
Protein accessionYP_001565077 
Protein GI160899495 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0914927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.293936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCT CGGTGGGCAT CGCCTTGTTT TTGGGCTTCA TCTTCCTGGG CAGCTGGCAG 
GTCCAGCGCC GTGCCTGGAA GCTGGACTTG ATAGAGCGCG TGGACCAGCG CGTGCACGCC
GCACCCGCTG CCCTGCCCCC GCCCGCCGAA TGGCCGCAGA TCACGGCCGC CGACCACGAG
TACCGCGCCG TGCAGGCCAG CGGCCACTGG CTGGCCGGCA AGACCGTGCT GACCCAGGCC
GTGACCGAAT TGGGCGCCGG CTTCTGGGTG CTGACGCCGC TGCAGATGGA CGACGGCAAC
CAGGTGCTGG TGAACCGGGG CTTCATTCCC ACAGCGCAGC GCGCGCGCTG GCAGGATCAG
CCCGCACAGG CGCCCCAGGA CCCGGTGACG GTGGACGGCC TGCTGCGCAT CAGCGAGCCG
CGCGGCGGCT TCCTGCGCGA GAACGATCCC GCGCAGCAGC GCTGGTTCTC GCGCGATGTG
GCGGCCATTG CACAGGCCCA GGGCCTGGAC CATGCAGCCC CCTACTTCAT CGACGCAGGC
CTGCCGGGCC AGCCCGTGGC AGACGGCACC TGGCCGCGCC CGGGCATGAC CGTGATCCGC
TTCCCCAACA GCCACCTGGT CTATGCGCTG ACATGGTATG GGCTTGCGCT GATGGTGGTC
GGCGCGGCCT GGCTGGTCAG GCGCAATGAC CGGCAGGCAA GCAGCAAGCC GTAA
 
Protein sequence
MLISVGIALF LGFIFLGSWQ VQRRAWKLDL IERVDQRVHA APAALPPPAE WPQITAADHE 
YRAVQASGHW LAGKTVLTQA VTELGAGFWV LTPLQMDDGN QVLVNRGFIP TAQRARWQDQ
PAQAPQDPVT VDGLLRISEP RGGFLRENDP AQQRWFSRDV AAIAQAQGLD HAAPYFIDAG
LPGQPVADGT WPRPGMTVIR FPNSHLVYAL TWYGLALMVV GAAWLVRRND RQASSKP