| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4058 |
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| Symbol | |
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| ID | 5749645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4467455 |
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| End bp | 4469392 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299160 |
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| Product | cytochrome o ubiquinol oxidase, subunit I |
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| Protein accession | YP_001565074 |
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| Protein GI | 160899492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.197273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.152019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATG AGCCCATCGT GCTGGCGACC TTCATCGCCG TGGTGCTCGG CGGCCTTGCC
GTGCTGGGCC TGCTCACCAA GTTCCGCCTG TGGGGCCCGC TGTGGCGCGA CTGGCTGTGC
AGCATCGACC ACAAGAAGAT CGGCATCATG TACATGATCC TCGGTCTGGT CATGCTGCTG
CGCGGCTTTG CCGACGCGCT GATGATGCGC CTGCAGCAGG CCATGGCCTT CGGCGACAAC
CTGGGCTACC TGCCTCCGCA CCACTACGAC CAGATCTTCA CGGCCCACGG CGTGATCATG
ATCTTCTTCG TGGCCATGCC CTTCGTGACC GGCCTGATGA ACTATCTGGT GCCGCTGCAG
ATCGGCGCCC GCGACGTGTC CTTCCCGTTC CTGAACAACT TCAGCTTCTG GATGACCACG
GGCGGCGCCG TGCTGGTGAT GATCTCGCTG TTCCTGGGCG AGTTCTCCAC CTCCGGCTGG
CTGGCACTGT CCAACCTGGG GGCGCAGAAC CCCGGGGTCG GGCTTGACTA CTACATCTGG
GGATTGCAGG TGGCCGGCGT CGGCACCACG CTGTCAGGCA TCAACCTGAT CGTGACCATC
ATCAAGATGC GCGCACCCGG CATGAACCTG ATGAAGATGC CCGTCTTCAC CTGGACCGCC
CTGTGCACCA ACGCGCTGAT CGTGGCCTCG TTCCCCATCC TGACCGCAGC CCTGGTGCTG
ATGTCGCTGG ACCGCTACGT CGGCACGAAC TTCTTCACGA ACGAGCTGGG CGGCAACCCC
ATGCTGTACG TGAACCTGAT CTGGATCTGG GGCCACCCCG AGGTCTACAT CCTGATCCTG
CCCTGCTTCG GCATCTTCTC TGAGATCGTC TCGACCTTCA GCCGCAAGCG CCTGTTCGGC
TACACCTCCA TGGTGTACGC GACGGTGTGT ATCACCATCC TGTCCTACCT GGTCTGGCTG
CACCACTTCT TCACCATGGG CTCCGGCGCC AGCGTGAACA CCTTCTTCGG CATCACGACG
ATGATCATCT CGATCCCGAC GGGCGCCAAG ATCTTCAACT GGCTGTTCAC CATGTACCGC
GGCCGCATCC GCTTCACGGT GCCGATGCTG TGGACCGTGG GCTTCATGTG CACCTTCGCC
ATCGGCGGCA TGACCGGCGT GCTGCTGGCC GTTCCCCCGG CCGACTTCGT GCTGCACAAC
AGCCTGTTCC TGATCGCCCA CTTCCACAAC GTGATCATCG GCGGCGTGGT GTTCGGCGTG
TTCGCCGGCA TCAACTTCTG GTTCCCCAAG GCCTTCGGCT ACAAGCTCGA CGAGTTCTGG
GGCAAGTGCT CGTTCTGGTT CTGGCTGGTC GGCTTCTGGG TCGCCTTCAC ACCGCTGTAC
GTGCTGGGCC TGATGGGCGT GACACGCCGT GCCAACCACT TCGAGGACCC CTCGCTGCAG
ATCTGGTTCG TGATCGCCGC CCTGGGCGCC GGCCTGGTGG CACTGGGCAT CGGCAGCTTC
CTGATCCAGC TGGTGGTCAG CTACTTCAAG CGCGACCAGC TGCGCGACGT GACCGGCGAC
CCCTGGGAAG GCCGCACGCT GGAGTGGGCC ACCTCCTCGC CCCCTCCCCA GTACAACTTC
GCCTTCACGC CCGTGGTGCA TGAGATCGAT GCCTGGTGGG ACATGAAGAA GCACGGCTAC
CAGCGTCCGC TGACCGGCTT CAAGCCCGTC CACATGCCGT CCAACACCGG CGCCGGCGTC
GTGATCGCTG CGCTGTCCAC GGTCTTCGGC TTCGCGATGA TCTGGCACAT GTGGCCCCTG
GCCATTGCGT CGTTCGCCGC CACCGTGCTG GCGTCGATCA TCCACACGTT CAACTACAAG
CGCGACTACT ACATCCCCGC CGCGGAAGTC GCGGCCACGG AAGAACTGCG CACACAACAG
CTGGCACGTC ATGTCTGA
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| Protein sequence | MAHEPIVLAT FIAVVLGGLA VLGLLTKFRL WGPLWRDWLC SIDHKKIGIM YMILGLVMLL
RGFADALMMR LQQAMAFGDN LGYLPPHHYD QIFTAHGVIM IFFVAMPFVT GLMNYLVPLQ
IGARDVSFPF LNNFSFWMTT GGAVLVMISL FLGEFSTSGW LALSNLGAQN PGVGLDYYIW
GLQVAGVGTT LSGINLIVTI IKMRAPGMNL MKMPVFTWTA LCTNALIVAS FPILTAALVL
MSLDRYVGTN FFTNELGGNP MLYVNLIWIW GHPEVYILIL PCFGIFSEIV STFSRKRLFG
YTSMVYATVC ITILSYLVWL HHFFTMGSGA SVNTFFGITT MIISIPTGAK IFNWLFTMYR
GRIRFTVPML WTVGFMCTFA IGGMTGVLLA VPPADFVLHN SLFLIAHFHN VIIGGVVFGV
FAGINFWFPK AFGYKLDEFW GKCSFWFWLV GFWVAFTPLY VLGLMGVTRR ANHFEDPSLQ
IWFVIAALGA GLVALGIGSF LIQLVVSYFK RDQLRDVTGD PWEGRTLEWA TSSPPPQYNF
AFTPVVHEID AWWDMKKHGY QRPLTGFKPV HMPSNTGAGV VIAALSTVFG FAMIWHMWPL
AIASFAATVL ASIIHTFNYK RDYYIPAAEV AATEELRTQQ LARHV
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