| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4054 |
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| Symbol | alaS |
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| ID | 5749641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4461160 |
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| End bp | 4463784 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299156 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001565070 |
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| Protein GI | 160899488 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.100715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.103124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC CCACTTTCAC CGTTGCCGAC ATTCGCAAGA GCTTTCTGGA CTTTTTCGCA
TCCAAGGGCC ACACCATCGT GGAGTCGAGC CCTCTGGTGC CCGGCAACGA TCCGACGCTG
ATGTTCACCA ACTCGGGCAT GGTCCAGTTC AAGGACGTGT TCCTGGGCAC CGACAAGCGC
CCCTACAAGC GCGCCACCTC GGTGCAGACC TGCCTGCGCG CAGGCGGCAA GCACAACGAT
CTGGAAAACG TGGGCTACAC GGCCCGCCAC CACACCTTCT TCGAGATGCT GGGCAACTGG
TCCTTCGGCG ACTACTTCAA GCGCGAGTCG CTCAAGTGGG CCTGGGAGCT GCTGACCGAG
GTCTACAAGC TGCCCAAGGA ACGCCTGCTG GCCACGGTCT ACGCCGAGGA CGACGAGGCC
TACGACATCT GGACCAAGGA AATCGGCCTG CCGCCCGAGC GCGTGATCCG CATCGGCGAC
AACAAGGGCG GCCGCTACAA GAGCGACAAC TTCTGGATGA TGGCCGACAC CGGCCCCTGC
GGCCCCTGCT CGGAAATCTT CTACGACCAC GGCGCGCACG TGGCCGGCGG CCCTCCCGGC
AGCCCTGACG AAGACGGCGA CCGCTTCATC GAGATCTGGA ACAACGTGTT CATGCAGTTC
GACATGGACG AGCAGGGCAA CGTCAAGCCG CTGCCCGCGC CCTGCGTGGA CACCGGCATG
GGCCTGGAGC GCCTGGCCGC CATCCTGCAG CATGTGCACA GCAACTATGA GATCGACCTG
TTCCAGGCGC TGATCAAGGC CGCTGCGCGC GAGACGCACA TCGCCGACAT CGAGACCCCC
TCGCTCAAGG TGATCGCCGA CCACATCCGC GCTACCGCCT TCCTGGTGGC CGACGGCGTG
ATCCCCTCCA ACGAAGGCCG CGGCTACGTG CAGCGCCGCA TCGTGCGCCG CGCCATCCGC
CACGGCTACA AGCTGGGCCA GAAGACCCCG TTCTTCCACA AGCTGGTCAA GGACCTGGTG
GCCGTGATGG GCGATGCCTA TCCCAAGATC CGCGAGCAGG AAGCGCGCAT CACCGAAGTG
CTGCGGGTCG AGGAAGAGCG CTTCTTCGAG ACCCTGGCCA ACGGCATGGA AATCCTGGAC
GCGGCGCTGG CCGGTGGCGC CAAGGTGCTG CCCGGCGACG TGGCCTTCAA GCTGCACGAC
ACCTACGGCT TCCCCCTGGA CCTGACCAAC GACGTCTGCC GCGAGCGCGG CCTGAGCGTG
GACGAGGCGG GCTTCCAGAC CGCCATGGAA GAGCAGAAGA ACAAGGCCCG CGCAGCAGGC
AAGTTCAAGA TGGACCGCGC CCTGGAATAC ACGGGCGATG CCAATGCCTT CACGGGCTAC
CAGAAGCTGG CCGAGGCCGC CAAGGTGGTG GCACTGTATG CCGAAGGCAG CGCCGTGCAG
GAACTCAAGG CCGGCCAGAG CGGCGTGGTC GTGCTCGACA CCACGCCTTT CTACGCCGAG
TCCGGCGGCC AGGTGGGCGA CCAGGGTGTG ATCAGCACCG CGGGCGCACG CTTCGCGGTC
GAGGACACGC TCAAGATCAA GGCCGATGTG TTCGGCCACC ACGGCGTGCT GGAGTCCGGC
AGCCTCAAGG TGGGCGATGC CGTGCAGGCC GAGGTGGACA CGCAGCTGCG TGCGGCCACC
ATGCGCAACC ACTCGGTCAC GCACATCATG CACAAGGCCC TGCGCGAAGT GCTGGGCGAC
CATGTGCAGC AAAAGGGCTC GCTGGTCAAC GCCGAGCGCA CGCGCTTTGA CTTTGCCCAC
AACCAGCCCG TGACCGCTGA AGAGATCCGC GAGATCGAAC GCCGCGTGAA CGCCGAGATC
CTGGCCAACA CGCCCACCGA TGCGCGCGTG ATGGACATCG AATCGGCCAA GGCCACGGGC
GCCATGATGC TGTTCGGCGA GAAGTACGGC GACTCCGTGC GCGTGCTGGA CATCGGCAGC
AGCCGCGAGC TGTGCGGCGG CACCCACGTG CAGCGCACGG GCGACATCGG CCTGTTCAAG
GTGGTGGGCG AAGGCGGCGT GGCCGCTGGC GTGCGCCGCA TCGAGGCGGT GACCGGCGAG
AACGCGCTGG CCTACCTGCA ATCGCTGGAA TCCACGGTGG ACCAGGCCGC CGCCGCGCTG
AAGGCGCCGA CGGCCGAGCT GAACACCCGC ATCGGCGGTG CGCTGGAGCA GATCCGCGCG
CTGGAGAAGG AAGTGGCTGC GCTCAAGGGC AAGCTCGCTT CCAGCCAGGG CGACGAGCTG
GCCGGCCAGG CCGTGGACGT CAAGGGCATC AAGGTGCTGG CCGCCAGGCT GGAAGGCGCC
GACGCCAAGA CCCTGCGCGA CACCATGGAC AAGCTCAAGG ACAAGCTGGG CGCCGCAGCC
ATCGTGCTGG CCGCCGTCGA TGGCGACAAG GTGCAACTGG CCGCAGGCGT GACCAAGGCC
GAGACCTCGC GCATCAAGGC TGGCGATCTG GTGAACTTCG TGGCCAGCCA GGTCGGCGGC
AAGGGCGGCG GCAAGCCCGA CATGGCCATG GCCGGCGGCA CGGACGCTTC GGGCCTGCCC
GCGGCGCTGG CCGGTGTGCA CGCCTGGGTG GCAGAGCGCG TCTGA
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| Protein sequence | MSTPTFTVAD IRKSFLDFFA SKGHTIVESS PLVPGNDPTL MFTNSGMVQF KDVFLGTDKR
PYKRATSVQT CLRAGGKHND LENVGYTARH HTFFEMLGNW SFGDYFKRES LKWAWELLTE
VYKLPKERLL ATVYAEDDEA YDIWTKEIGL PPERVIRIGD NKGGRYKSDN FWMMADTGPC
GPCSEIFYDH GAHVAGGPPG SPDEDGDRFI EIWNNVFMQF DMDEQGNVKP LPAPCVDTGM
GLERLAAILQ HVHSNYEIDL FQALIKAAAR ETHIADIETP SLKVIADHIR ATAFLVADGV
IPSNEGRGYV QRRIVRRAIR HGYKLGQKTP FFHKLVKDLV AVMGDAYPKI REQEARITEV
LRVEEERFFE TLANGMEILD AALAGGAKVL PGDVAFKLHD TYGFPLDLTN DVCRERGLSV
DEAGFQTAME EQKNKARAAG KFKMDRALEY TGDANAFTGY QKLAEAAKVV ALYAEGSAVQ
ELKAGQSGVV VLDTTPFYAE SGGQVGDQGV ISTAGARFAV EDTLKIKADV FGHHGVLESG
SLKVGDAVQA EVDTQLRAAT MRNHSVTHIM HKALREVLGD HVQQKGSLVN AERTRFDFAH
NQPVTAEEIR EIERRVNAEI LANTPTDARV MDIESAKATG AMMLFGEKYG DSVRVLDIGS
SRELCGGTHV QRTGDIGLFK VVGEGGVAAG VRRIEAVTGE NALAYLQSLE STVDQAAAAL
KAPTAELNTR IGGALEQIRA LEKEVAALKG KLASSQGDEL AGQAVDVKGI KVLAARLEGA
DAKTLRDTMD KLKDKLGAAA IVLAAVDGDK VQLAAGVTKA ETSRIKAGDL VNFVASQVGG
KGGGKPDMAM AGGTDASGLP AALAGVHAWV AERV
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