| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4050 |
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| Symbol | trmB |
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| ID | 5749637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4456861 |
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| End bp | 4457640 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641299152 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001565066 |
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| Protein GI | 160899484 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.244378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.090551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGGCG ATACCCCGAA CACCATGTCC GCTGCCCCCG GTGCGCCGCA CGATTCCTCT
TCGCCCTCCA CACCTGCGGC CGCCCGTACC GGCCAGCCGC CCGAGGGCGT GGCCCATCCC
AAGACCATTA AGAGCTATGT GCGCCGCGCC GGCCGCACCA CGACAGGCCA GGCCAAGGCC
TTCGAGGAGC TGGGTCCGCG CTTCGTGCTG AACTACCAGG CCGCGCCGCT GGATGCCTCT
GCCACCTATG GCCGCCAGGC ACCCCTGATC CTGGAGATCG GCTTCGGCAT GGGCGAGGCC
ACGGCGCACA TCGCGCGCGT GCGCCCCGAT GACAACTTCC TGTGCTGCGA GGTGCACGAG
CCCGGCGTGG GCGCCCTGCT CAAGCGCATT GGCGAGCAGG ACATCTCCAA CATCCGCATC
CTGCAGCACG ACGCCGTCGA AGTCATCGAC AACATGCTGC CCGAGGCCAG CCTGGACGGC
ATCCACATCT TCTTCCCCGA TCCCTGGCAC AAGAAAAAGC ACAACAAGCG CCGCCTGATC
CAGGAGCCTC TGGTAGCCAA GCTGGCACGA CGGCTGCGTC CCGGCGGCTA CATCCACTGC
GCCACCGACT GGGAGCCCTA TGCGGTGCAG ATGCTGGAGG TGCTGGGTGC GGAACCCCTG
CTGGCCAACA CGGCCGAGGG CTATGCCGCC AAGCCCGACT ACCGGCCGCT GACCAAGTTC
GAAAACCGTG GCATCCGCCT GGGCCACGGT GTGTGGGATC TGGTGTTTGA GCGCCGCTGA
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| Protein sequence | MDGDTPNTMS AAPGAPHDSS SPSTPAAART GQPPEGVAHP KTIKSYVRRA GRTTTGQAKA
FEELGPRFVL NYQAAPLDAS ATYGRQAPLI LEIGFGMGEA TAHIARVRPD DNFLCCEVHE
PGVGALLKRI GEQDISNIRI LQHDAVEVID NMLPEASLDG IHIFFPDPWH KKKHNKRRLI
QEPLVAKLAR RLRPGGYIHC ATDWEPYAVQ MLEVLGAEPL LANTAEGYAA KPDYRPLTKF
ENRGIRLGHG VWDLVFERR
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