Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4041 |
Symbol | |
ID | 5749628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4449066 |
End bp | 4449914 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641299143 |
Product | diguanylate cyclase |
Protein accession | YP_001565057 |
Protein GI | 160899475 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0649407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCGC GGCGACAATC GAGCCTACAC ACTGATACAC TTCACTGGCT TTTCATTCAG CCCTCCGTGA CTGCCCCCGC ATCCCACCAA TCCGTATACC TGCGCGACCT GCGCCTGGCC ACAGCCCACG CGCTGGTTAC CCACGCTGGT GGGGCGGTCC ATCTGCCCAC GGATTCGCCG ACGCGATATC TGCAGGCGCT GATCGATGAA CTGTGCTCGC TGTCGCTGCG CGACCCGCTC ACGGGGCTGG CCAACCGCCG CCATTTCCGC ACCATTGCCG AGCGCGAGAT CGACCGCGTG GCGCGGTCTG GCGAAGCGGC CCTGATGCTG ATGCTGGACA TCGACCATTT CAAGCAGATC AACGACCAGC ACGGCCATAT CGTGGGCGAC CGGGTTCTGC AGTCGGTGGC CCGTACCCTG ACCAATTGCG TGCGCCCCAT GGACACGCTG GCCCGCTACG GAGGAGAGGA ATTCGCCATC GTGCTGCCCG CCTGCCCTGC GACCTTCGGT CTCTCCGTGG CCGAACGCAT ACGCAGCGCC ATCGAGCGCA TGCCGGTCGT CATCTCACCC ACGCTGACGC TGCAGATCAC CATCAGCATC GGCGGCGCCT ATGCGCTGCA GTGGATACGC AGCACCACAA CCTTGTGGAC CGAGCGTGCC GACAAACAGT TGTACCTGGC CAAATCCGCC GGCCGCAACC GCGTGCACAT TGAAGAACAA CCTGACAGTA CGGTAAGCGC GGAGGAAAAA AGCCTGCTTT TCGGACCTTT GTATGCCCCG TCCCCGTTTG ACAATGGGCT GAATCCAGAT ATTGCAACCG ATGTGGACCC CGAAGATGGA CTCCGCTGA
|
Protein sequence | MPARRQSSLH TDTLHWLFIQ PSVTAPASHQ SVYLRDLRLA TAHALVTHAG GAVHLPTDSP TRYLQALIDE LCSLSLRDPL TGLANRRHFR TIAEREIDRV ARSGEAALML MLDIDHFKQI NDQHGHIVGD RVLQSVARTL TNCVRPMDTL ARYGGEEFAI VLPACPATFG LSVAERIRSA IERMPVVISP TLTLQITISI GGAYALQWIR STTTLWTERA DKQLYLAKSA GRNRVHIEEQ PDSTVSAEEK SLLFGPLYAP SPFDNGLNPD IATDVDPEDG LR
|
| |