Gene Daci_4039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4039 
Symbol 
ID5749626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4446734 
End bp4447204 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID641299141 
Producttransport-associated protein 
Protein accessionYP_001565055 
Protein GI160899473 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.130048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0885216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCA TCACCCAACG CTGCTGCCAC ATCCTCGCCG TGTCCGCCCT GGCCTTCGGC 
CTCGCCGCAT GCGGCAAGAC CGAAGACACT GCCGGCCAGA AGCTCGACTC CGCCGTTCAG
CAGTCCCAGC AGGCCGCGCA AAGCGCAGGC CAGAAGATCG ACAACGCGAT GAGCAGCGCC
GGCACCAAGA TCGAGGAAGG CGCGATGAAG GCCGAATCGG CCACCACCAA CGCCATGAGC
CAGGCAGGCG CCGCGCTCGA CGATGCAGGC ATCACCGCGC AGATCAAGGC CGACCTGATC
AAGGAACCCG ATATCTCCGC CCTCAAGATC GACGTGGACA CCAAGGCCGG CGCCGTCACG
CTGACCGGCT CGGTGCCCAG CGATGCGCTC AAGATGCGCG CCGGCGAAAT TGCCAAGTCC
GTCAAGGGCG TGAACAACGT CAGCAACATG CTGGAGATCA AGGCCAGCTG A
 
Protein sequence
MTFITQRCCH ILAVSALAFG LAACGKTEDT AGQKLDSAVQ QSQQAAQSAG QKIDNAMSSA 
GTKIEEGAMK AESATTNAMS QAGAALDDAG ITAQIKADLI KEPDISALKI DVDTKAGAVT
LTGSVPSDAL KMRAGEIAKS VKGVNNVSNM LEIKAS