Gene Daci_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4030 
Symbol 
ID5749617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4437814 
End bp4438290 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID641299132 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001565046 
Protein GI160899464 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.06569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.373747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC AAGACATTCC CGACCATGCC AATGACCTGG TGCTCACGCG CCTGCTGGAC 
ATCCCCGCCG ACAGGCTCTA CCGCTGCTGG ACCGAACCCG CGCTGATCCA GCAATGGTTT
GCGCCCAGCC CCTGGAGCGT GTCCCGCGTG GACAACGATG TGCGGCCCGG CGGCCACAGC
CTCATCGTCA TGCGCAGCCC CGAGGGGCAG GAGATGCCCG GGCGCGGCGT CTATCTGGAA
GTCATTCCCA ACCGCCGCCT GGTCTTCACC GACGCCTTCA CCCAAGGCTG GGTGCCTGCC
GACAAGCCCT TCATGACGGG CATCGTCAGC TTCGATCCCG AAGGCAGCCA GACCCGCTAT
ACCGCCCGGG TGCGCCATTG GAGTGCTGCC GACCGCGCCC AGCACGAAGC CATGGGTTTT
CACACCGGCT GGGACCAGTG CACGGACCAG CTGGCCGAGC TCGCAGCCCG GCTCTGA
 
Protein sequence
MTAQDIPDHA NDLVLTRLLD IPADRLYRCW TEPALIQQWF APSPWSVSRV DNDVRPGGHS 
LIVMRSPEGQ EMPGRGVYLE VIPNRRLVFT DAFTQGWVPA DKPFMTGIVS FDPEGSQTRY
TARVRHWSAA DRAQHEAMGF HTGWDQCTDQ LAELAARL