Gene Daci_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4027 
Symbol 
ID5749614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4436344 
End bp4436847 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID641299129 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001565043 
Protein GI160899461 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.560567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.360128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGC ACGCCGGCCG CATCCAGCCC TGCCTCTGGT TCGACAACCA GGGCGAGCAG 
GCAGCGCAGT TCTATACGGA GGTGTTTCCC GATTCACGCA TCACCGCCAT TGCCCGCTAT
GGCGAAGCCG GCCGTGACAT CCACGGCAGG CCGGCCGGCA GTGTGATGAC GGTGCAGTTC
GAGCTGGAGG GCCAGCCCTT TCTGGCGCTC AACGGCGGGC CCATGTTCCG CTTCAACGAG
GCGGTCTCGC TGATGGTCAG TTGCCATACC CAGGATGAGA TAGACCACTA CTGGAGCCGC
CTGTCGGACG GCGGCGACCC TGCGGCCCGG CAATGCGGCT GGCTCAAGGA CCGCTACGGC
CTGTCCTGGC AAATCGTTCC GGCCCAGATG GCCAGCTGGA TGGGAGGACC TGACGCAGCC
GCCGCCCAGC GCGTGATGCA GGCCCTGCTG GGCATGCAAA AGCTCGACAT CGCCGCCCTT
GAGCGCGCGC ATGACGGCCC GTGA
 
Protein sequence
MALHAGRIQP CLWFDNQGEQ AAQFYTEVFP DSRITAIARY GEAGRDIHGR PAGSVMTVQF 
ELEGQPFLAL NGGPMFRFNE AVSLMVSCHT QDEIDHYWSR LSDGGDPAAR QCGWLKDRYG
LSWQIVPAQM ASWMGGPDAA AAQRVMQALL GMQKLDIAAL ERAHDGP