Gene Daci_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4024 
Symbol 
ID5749611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4433591 
End bp4434571 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID641299126 
Productaldo/keto reductase 
Protein accessionYP_001565040 
Protein GI160899458 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.450342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.165527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG CCCCTTCCCT CCGTTCCCTG GGCCGCAGCG GCCTGCAGGT CTCGCCGCTG 
TGCTTTGGCG GCAATGTCTT CGGCTGGACC GTGGACGAGG CCACGTCGTT CTCGCTGCTC
GACGCCTGGC TGGATGCCGG AATGAACTTC ATCGACACGG CCGACGTGTA CTCGCGCTGG
GCGCCGGGCC ATGCGGGCGG TGAGTCCGAG TCCGTGATCG GCAAATGGCT CAGGCGCAGC
GGACGGCGCG CCGACATCGT GCTGGCCACC AAGGTCGGCA AGGACATGGG CGAAGGCCGG
GTGGGCCTGC GCCCCGAGTA CATCCGCCAG GCCGTGGATG CCTCGCTGCA GCGCCTGCAG
ACGGACTACA TCGACCTGTA CCAGTCGCAT GACGACGACG CCAGCGTGCC GCTGGCCGAT
ACCCTGGGCG CCTTTGCAGA CCTGATTGCT GCAGGCAAGG TGCGGGCCAT TGGCGCCTCC
AACCACAGCG CGCCGCGCCT GGCCGAGGCC CTGCGCACCA GCGCCGAGCT GGGCCTGCCG
CGCTACGAGA GCCTGCAGCC GCTGTACAAC CTGTACGACC GCGCCGTGCT GGAGCGCGAT
CTGGCGCCGC TGTGCGCGGC CGAGCAGGTG GGCATCATCA ACTTCTATGC GCTGGCAGCA
GGTTTTCTGA CGGGCAAGTA CCGCAGCAGC GAAGACGCAG CCAAGAGTGC GCGCGGCGGC
AAGACCGTGG CCACCTACCT GAATCCGCGC GGCCTGCGCA TTGTGCAGGC CCTGGACGCC
GTGGCTGCGC GCCTGAACAG CCAGCCCGCG TGCGTGGCCC TGGCCTGGCA GATGCAGCGC
CCGTTTGTGA CCTCGCCCAT CGCAAGCGCG ACCTCGCTGG CCCAGTTGCA GCAACTGGTG
CAGGCCACGC GCCTGCAGCT GTCGGCTCAG GACGTGGCCG AACTCAACCA GGCCAGTCAG
GAAGAAGGCG CAAGGGACTG A
 
Protein sequence
MAQAPSLRSL GRSGLQVSPL CFGGNVFGWT VDEATSFSLL DAWLDAGMNF IDTADVYSRW 
APGHAGGESE SVIGKWLRRS GRRADIVLAT KVGKDMGEGR VGLRPEYIRQ AVDASLQRLQ
TDYIDLYQSH DDDASVPLAD TLGAFADLIA AGKVRAIGAS NHSAPRLAEA LRTSAELGLP
RYESLQPLYN LYDRAVLERD LAPLCAAEQV GIINFYALAA GFLTGKYRSS EDAAKSARGG
KTVATYLNPR GLRIVQALDA VAARLNSQPA CVALAWQMQR PFVTSPIASA TSLAQLQQLV
QATRLQLSAQ DVAELNQASQ EEGARD