Gene Daci_4011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4011 
Symbol 
ID5749598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4418885 
End bp4419541 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID641299113 
Producthypothetical protein 
Protein accessionYP_001565027 
Protein GI160899445 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.798676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT GCGCCAAACC CCGGGCCAGG GGCGATCGGG TAAGCTTGCC GCCCTCCATG 
CCACAGACAC TCCGCGCGCC CGCGCACAGC GAACTCATCA TCAAGAAAAG CCGCTTCATC
GGTTGCGTGC AGCCCATGGC CGACCGCGCC AGCGCCCAGG CGGTGGTCGA TGCGCTATGG
CGCGAGCACC CCGGCGCCGC CCATGTCTGC TGGGCGCTGC TGGCAGCCGG ACAGTCGGCA
GCCGTCGATG ACGGCGAGCC CAGCGGCACG GCAGGCCGTC CCATGCTGGA TGTGCTGCGC
CACCAGGATC TGGAAGGCGT GCTGGCCACC GTGGTGCGCT ACTTCGGCGG TGTCAAGCTG
GGCGCAGGTG GCCTGGTGCG CGCCTACACC GATGCCGTGG CCCAGGCCCT GCTGACCGCC
GAGAAAGTGA CACTGCAGCG CATGCAATCG CTGCGCTGCG CCGTGCCCTA TGCGCTGGAA
GGCCTGGTGC GCCGCGAGAT CGATGCGGCA GGCGCCGAGC TGCTCCAGGT CGAGCATGGA
TCGCTGGTGC AGTTCGATCT GCGCCTGCCG CAGTCGCAGG CTGAAGGCTT TGTGAGCCGC
CTCAACGAGA GCGGTCAAGG ACGCGTGGGC TGGATGGAAG TCCACCCCTG CGAATGA
 
Protein sequence
MNPCAKPRAR GDRVSLPPSM PQTLRAPAHS ELIIKKSRFI GCVQPMADRA SAQAVVDALW 
REHPGAAHVC WALLAAGQSA AVDDGEPSGT AGRPMLDVLR HQDLEGVLAT VVRYFGGVKL
GAGGLVRAYT DAVAQALLTA EKVTLQRMQS LRCAVPYALE GLVRREIDAA GAELLQVEHG
SLVQFDLRLP QSQAEGFVSR LNESGQGRVG WMEVHPCE