Gene Daci_3995 details

Gene Information

• Locus tag: Daci_3995
• Symbol: hscA
• ID: 5749582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Delftia acidovorans SPH-1
• Kingdom: Bacteria
• Replicon accession: NC_010002
• Strand: -
• Start bp: 4398911
• End bp: 4400779
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641299097
• Product: chaperone protein HscA
• Protein accession: YP_001565011
• Protein GI: 160899429
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.0300549
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCTTT TGCAGATTTC CGAACCCGGT CAGTCCCCCG ATCCCCACCA GCGGCGCATT 
GCCGTGGGCA TCGACCTGGG CACCACGCAT TCGCTGGTCG CCGCTGTCCG CAATGGCGTG 
GCCGAATGCC TGCCGGATGA CCAGGGCCGA GTGCTGCTGC CTTCTGTCGT GCGCTATCTG 
CCCCAGGGCC GCCGCGAGAT CGGCCACGCC GCCCAGGCTG CACTGTCTAC CGACGCGGGC 
AACACCATTG CCTCGGCCAA GCGCTTCATG GGCCGCACGC TGGCTGACAT CGATGCGCCG 
GAAAAGCTGC CTTACCGCTT TGCGGAGCAG GAGGCCGGCC GTGGCGTGAT CGGGATCGAG 
ACCGTCGATG GCACCAAGAC AGCCGTGGAG GTCAGCGCCG AGATCCTGGC TACGCTGCGT 
TTCCGTGCCG AAGACACCTT CAATGACGAC ATCCATGGCG CCGTCATCAC CGTGCCCGCC 
TACTTTGACG ATGCACAACG CCAAGCCACC AAGGATGCGG CAAAGCTCGC CGGCATCAAC 
CTGCTGCGCC TGATCAACGA ACCCACGGCT GCAGCCATTG CCTACGGCCT GGACAACGGC 
TCCGAAGGCG TCTACGCCGT CTACGACCTG GGTGGCGGCA CCTTCGACAT TTCTATCCTG 
CGTCTGTCCC AGGGTGTGTT CGAAGTCGTC TCCACTGGCG GCGATTCGGC CCTGGGGGGT 
GACGACTACG ATGCGGCTTT GGCCGAGTGG GTGGCCCAGC AGACCGGCGT GGTTCCCCAG 
ACGGCCGAGG ACAAGGCCCG CTGGCGCATG GCGGCGCGCC TTTGCAAGCA GGCATTGACG 
GATGCACAGG TCGCAACGCT CACGGCCGAG CTGTCCACCG GCGCTGTGCA TTTCGATGTA 
AAGCGCAGCG ATTTCGATGC GAGCACGGCC CATCTGACGG CACGTTCGCT GGCGGCCGTG 
CGCCGCGCGC TCAAGGACGC AGGGCTGGCG CGCGACGAAG TGCAGGGCGT GGTGCTGGTC 
GGCGGTTCCA CCCGCATGCC CCAGGTGCGC GAGGCCGTGG CCGAGTTCTT TGGCCGCGAT 
CCTCTCATCA ATCTCAACCC CGACGAAGTC GTCGCGCTGG GGGCCGCCAT CCAGGCCAAC 
CAGCTCGCTG GCAACAGCTC CAGCGGCGAC ATGCTGCTGC TCGACGTGAT TCCTCTGTCC 
CTGGGCGTGG AGACCATGGG CGGCCTTGTC GAGCGAATCA TCAGCCGCAA CGAGACCATT 
CCCACAGCCC GTGCCCAGGA CTTCACCACC TACAAGGATG GTCAGACGGC CCTGGCCGTC 
CATGTAGTGC AGGGCGAGCG CGACCTGGTG GCGGACTGCC GCAGCCTGGC GCGTTTCGAG 
CTGCGCGGCA TCCCGCCCAT GGCGGCTGGT GCGGCCCGCA TCCGTGTGAC CTTCACCGTG 
GATGCCGACG GCCTGCTGTC GGTAGGCGCC AAGGAGCAGA CCAGCGGCGT CGAGGCCCAT 
ATCCATGTCA AGCCGTCGTA CGGCCTGTCG GACGACGAGG TTGCCCGCAT GCTGCAGGAC 
GGCTTTGCCA CGGCCCAGCA GGACATGCAG GCCCGCGCAC TGGTGGAGGC ACGTGTCGAC 
GCCGATCGCA TGCTGATGGC CACCGAAAGC GCTCTGCAGG CCGATGGCGA TGTGCTCGCC 
GCGGACCAAC GCGCAGCCAT CGATGCGCTG ATCGACGCCC TGCGTGCCAG CGTGGGCTCC 
GAGGATGCCG CCGTCATCGA GGCCGCGACA CAAGCGCTGG CCAAGGGCAC GGAGTCCTTC 
GCCGCCGAGC GCATGAACCG CAGCATCCAG CAGGCCCTGG CCGGCAAGAG CGTGCAATCC 
CTTTCCTGA 

 

Protein sequence

MALLQISEPG QSPDPHQRRI AVGIDLGTTH SLVAAVRNGV AECLPDDQGR VLLPSVVRYL 
PQGRREIGHA AQAALSTDAG NTIASAKRFM GRTLADIDAP EKLPYRFAEQ EAGRGVIGIE 
TVDGTKTAVE VSAEILATLR FRAEDTFNDD IHGAVITVPA YFDDAQRQAT KDAAKLAGIN 
LLRLINEPTA AAIAYGLDNG SEGVYAVYDL GGGTFDISIL RLSQGVFEVV STGGDSALGG 
DDYDAALAEW VAQQTGVVPQ TAEDKARWRM AARLCKQALT DAQVATLTAE LSTGAVHFDV 
KRSDFDASTA HLTARSLAAV RRALKDAGLA RDEVQGVVLV GGSTRMPQVR EAVAEFFGRD 
PLINLNPDEV VALGAAIQAN QLAGNSSSGD MLLLDVIPLS LGVETMGGLV ERIISRNETI 
PTARAQDFTT YKDGQTALAV HVVQGERDLV ADCRSLARFE LRGIPPMAAG AARIRVTFTV 
DADGLLSVGA KEQTSGVEAH IHVKPSYGLS DDEVARMLQD GFATAQQDMQ ARALVEARVD 
ADRMLMATES ALQADGDVLA ADQRAAIDAL IDALRASVGS EDAAVIEAAT QALAKGTESF 
AAERMNRSIQ QALAGKSVQS LS